Blautia sp. SC05B48: EYS05_11425
Help
Entry
EYS05_11425 CDS
T06243
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
blab
Blautia sp. SC05B48
Pathway
blab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYS05_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blab03019
]
EYS05_11425
Messenger RNA biogenesis [BR:
blab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EYS05_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
SIS_2
FCSD-flav_bind
Motif
Other DBs
NCBI-ProteinID:
QCU02802
LinkDB
All DBs
Position
2481835..2483769
Genome browser
AA seq
644 aa
AA seq
DB search
MEERFLKSENNDDNKNAESRVQVSAGGARRTAARQKNAGSRTRQYRGGSKNRQDKPFRPT
AKKTVAGGVVKNSRNTQKPAKTGGRPSGRKNGRRTTSKLKIIPLGGLEQIGMNITAFEYG
DSIVVVDCGLSFPEDDMLGIDLVIPDVTYLKENISKVKGFVITHGHEDHIGALPYVLKEI
NVPIYATKLTLGLIRNKLKEHNLMRSTKLKEVKHGQVINLGDFAVEFIKTNHSIQDASAL
AIYSPVGIVIHTGDFKVDYTPVFGDAIDLQRFAEIGKKGVLALMCESTNAERPGFTMSER
TVGHVFDNLFNEYRTSRIIIATFASNVDRVQQIINTAYRFGRKVAVEGRSMVNVISVASE
LGYLQIPENTLIEIDQVKNYPDDKVVLITTGSQGESMAALSRMAANIHKKITIKPNDTII
FSSNPIPGNEKAVSKVINELSMKGAKVIFQDVHVSGHACQEEIKLIYSLVKPKYAIPIHG
EYRHLTAQKHIVEDLGIPKENIFILSSGNVLELDGQDAKVTGSVHTGAIFVDGLGVGDVG
NIVLRDRQHLSEDGIMIVVMTLERHSNVVLAGPDIVSRGFVYVRESEDLMEHARQVVETA
LDSCLENNITDWGKIKTEVKDALGEYLWKRTKRNPMILPIIMEA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgatttttgaaaagcgagaacaacgatgacaacaaaaatgcggagagcaga
gtacaagtttccgcaggcggtgccagaagaaccgcagcaagacaaaagaatgccggatca
agaacaagacagtatcgtggtggcagcaaaaaccgtcaggataagcctttccggccaaca
gcaaagaaaacagtagccggtggcgttgtaaaaaacagcagaaacacacagaaaccggca
aagaccggcggcaggccatccggtcggaaaaacggccgcagaacaacatccaagcttaag
atcataccacttggcggtctggagcagatcggaatgaacattaccgcttttgagtatggc
gacagtattgtagttgtagactgtggtctttctttccctgaggacgatatgttgggaatc
gatctggtcattccggatgtaacataccttaaggaaaatatttccaaggtgaagggattt
gtgatcactcatggacatgaggatcatatcggagctcttccgtatgtgttgaaagagatc
aatgttccgatctatgctaccaagctgacactgggactgatccgcaacaaactgaaagag
cataaccttatgcgttctaccaaattgaaagaggtaaaacacgggcaggtgatcaatctt
ggggatttcgctgtggaatttatcaaaacgaatcacagtatccaggatgcatccgcactt
gctatttattcaccggtgggaatcgtgatacacacaggagactttaaagttgattataca
ccggtatttggagatgccatagatctgcagcgttttgcagagatcggcaagaagggtgtg
cttgcactgatgtgtgagagtaccaatgcagagagaccgggatttacaatgtccgagcgt
acagtgggacatgtatttgataatctttttaatgagtaccggacatccaggatcatcatt
gcaacctttgcatccaacgtggatcgtgtgcagcagatcattaatactgcataccggttc
ggaagaaaggttgctgtggaaggccgcagtatggtcaatgttatttccgtagcgtcagag
cttggctatctgcagatcccggagaacacactgatcgagatcgatcaggtgaagaattat
ccggacgacaaggtggttctgatcacaaccggaagccagggtgagtccatggcggcactt
tcccgtatggcagccaatatccataagaagatcacgatcaagcctaacgataccatcatt
ttcagctccaatccgatccccggaaatgaaaaggcagtttccaaggtcatcaacgaactg
tctatgaagggagccaaggttattttccaggatgtccatgtttccggacatgcctgccag
gaggagatcaagctgatctactccctcgtaaaaccgaaatatgccattccaatccatggt
gagtaccgtcatctgactgcacagaaacacattgtggaagatctgggaatcccgaaggag
aatatttttatcctttcttccggaaatgttctggagttggacggacaggatgccaaggtg
acaggaagcgttcatacaggtgcgatcttcgtagacggacttggcgttggcgatgtggga
aatatcgtactccgtgaccgtcagcacctgtctgaagatggaatcatgatcgtagttatg
acactggagcgccacagtaatgtagttctcgcaggtccggatatcgtttccagaggtttt
gtgtatgtaagagaatctgaggatcttatggagcatgccagacaggttgtggaaactgca
ctggattcctgcctggagaacaatatcacggactggggcaagatcaaaaccgaggtcaag
gatgcccttggagagtatctgtggaaacggaccaagagaaatcctatgatcctgcctatc
attatggaggcgtag
DBGET
integrated database retrieval system
