KEGG   Bremia lactucae (lettuce downy mildew): 94343861
Entry
94343861          CDS       T10371                                 
Symbol
CCR75_000082
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
blac  Bremia lactucae (lettuce downy mildew)
Pathway
blac03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:blac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    94343861 (CCR75_000082)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:blac03041]
    94343861 (CCR75_000082)
Spliceosome [BR:blac03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    94343861 (CCR75_000082)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin PRP4 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR19_1st WD_LRWD1 Beta-prop_VPS8 WDR54 Beta-prop_RIG_1st Beta-prop_ACSF4 Glyco_tran_WecG Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 94343861
NCBI-ProteinID: XP_067817105
UniProt: A0A976IDE1
LinkDB
Position
LG4:5358122..5359747
AA seq 541 aa
MGERKSIYYGAIDASMGEMLPSSFKISSKSGNMDRNLEVAIRAGNVNVSDNVETEVLQLS
ESSRAAQEKHAQLLRRIEIEKRARNIAVPTVVEEVIQRLRQLGEPITLFGERPADRRERL
RELLSHLEVEAEETGVIHQVLAEIRKHNVGAGFVASGAAGNEKVARRSTKRLDDQLFYVP
LKNEATKSVRATIFAHTVKVVGARLKRERQEKHRITEKTMDRHAAELYATAPKMATIASQ
NGDVRPLSCVRFSIDGAHVATGSWSSLVKVWDATKASEVKVFRGHEDRVTGIAWHPTNVF
TEMMDGSGSVCLCSGSADGTARLWSAARNEPLAVLQGHKARLGRVAFHPQGNYVGTTSFD
HTWRLWDVATAQELLLQEGHYREVYAIAFQNDGALVATGDLNGNGRVWDLRSGKAILPLQ
GHSKQILSMDFAANGVQLASGSDDRSVRIWDLRQQKCSYMLPAHSNLVSDVRFSPGSNEL
LLSASYDSSIKLWRTRDWKLMATLRGHDGKVMSADFAPDEKHIVSCGFDRTFKLWAHENE
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgggtgagcgcaagagcatctactacggcgccatcgatgccagcatgggagagatgttg
cctagcagcttcaaaattagcagcaaaagtggcaacatggacagaaacttggaggtggca
atacgtgctggtaacgtgaacgtatcggacaacgtggagactgaggtgctgcagctatca
gagagcagtcgtgctgcccaggaaaaacacgcgcagctgctgcgccgcattgaaatagaa
aaacgagcgcgcaacattgcagtgcctactgtagtggaggaagtgattcagcggctgcgg
cagctcggtgagccaatcacgttgttcggggagcgaccggctgaccgccgcgagcgatta
cgtgagcttctatcacaccttgaggtcgaagcagaagaaactggtgttattcatcaggtc
ttagcagagattcgaaagcataacgttggtgctgggttcgtggcttcaggagcagcagga
aatgaaaaggtcgctcgcaggtcgacaaagcggctagatgaccaattgttttacgtgcct
ttgaagaatgaagcaacaaaaagtgtgcgtgctacgatctttgctcataccgtcaaagtt
gtgggcgcacggttgaagcgagagcgacaggagaagcatcggattacggagaagacaatg
gatcgtcacgcggccgaattgtacgccacggctccaaagatggctactattgcaagtcaa
aatggtgatgtgcggccactgtcgtgtgtgaggttttcaattgatggggctcatgtagcg
acgggctcgtggagtagtcttgtaaaagtttgggatgccacgaaagcgagtgaggtcaaa
gtattccgtggacacgaagatcgggtgactgggattgcatggcatccaacgaatgtattt
actgaaatgatggatgggtcaggttccgtgtgtttgtgcagcggatcggctgacggtacg
gcacggctctggagtgcagctcgcaacgagccactggccgtattgcaaggtcataaggca
cggctgggtagagttgctttccatccgcaaggaaactacgttggtactactagttttgat
cacacgtggcgattatgggacgttgcaacggcacaagagctgctcttacaggaaggtcac
tatagagaagtgtatgccattgcgtttcaaaatgatggcgcgctcgtagcaaccggtgac
ttgaatggaaatggacgtgtgtgggaccttcgttcgggcaaagccatactaccattgcag
ggccattccaagcagatattatcgatggattttgccgcgaatggcgtacaactagcgtca
ggtagtgatgaccgtagtgttcgaatctgggacttgcgacagcaaaagtgctcgtacatg
cttccagcacatagtaacttggtaagcgacgtccgcttctcgcctggatccaatgagctt
ttgttgagtgcgtcatacgattcgtccattaaactctggagaactcgcgattggaagctg
atggctacgcttcgcggacatgatgggaaggtgatgtcagccgattttgctccagacgaa
aagcatattgtatcgtgtggtttcgaccgtacttttaaactctgggctcatgagaacgaa
ttttaa

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