Bremia lactucae (lettuce downy mildew): 94344455
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Entry
94344455 CDS
T10371
Symbol
CCR75_000678
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
blac Bremia lactucae (lettuce downy mildew)
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blac03021
]
94344455 (CCR75_000678)
03036 Chromosome and associated proteins [BR:
blac03036
]
94344455 (CCR75_000678)
Transcription machinery [BR:
blac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
94344455 (CCR75_000678)
Chromosome and associated proteins [BR:
blac03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
94344455 (CCR75_000678)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
Tex_central_region
YqgF
HTH_44
SPT6_acidic
Tex_YqgF
HHH_9
Spt6_S1
HHH_3
ExbD
GTP_cyclohydroI
Maf_flag10_N
Motif
Other DBs
NCBI-GeneID:
94344455
NCBI-ProteinID:
XP_067815219
UniProt:
A0A976FFH0
LinkDB
All DBs
Position
LG1:complement(13044635..13049846)
Genome browser
AA seq
1537 aa
AA seq
DB search
MSDDEMFGAGSPTVSDSDSDAIKREKNTKKKRKISRDGSHKSKKKSKSKHAKQSTSNDDA
DKKSKSTFIDDMASESDDGRAEKEESDDDDDEDDEEGEDRNEYENDGFVVDDTGSDEEGT
ARYRRRRRKKEKKLKRLKQKVEEIDDEDLMLVRENMGMDTGPARSDSEDEVMERSARKVK
TDDDESGLMSRELSYRMFGDSSEEEDLAPQRANNYLGNDEYESDDIDEFIVDDDEEGREG
PRRRRKQEPIPVSMQGPSVYQMGEAEELFGDMDGFLDASSEKILGKTPAKPKKATLLEKF
EPSVLKEHMMTADVIAVRENDLPERSQYLYKSRDFPDAEDRAEESEWISDFIIKNLERRN
QRSSAASRGEIVSAIDTVLRFYHDEKLEPAFVQRYCKEYWKVVGLHTENLYEILDLDVKW
DKLERKRRSFQSGIQRVIDSSNAKESAFIRKCYEQLFGTPDEKIYKDLSEFFALDAQESN
GDDKESSDHKYRRPVRRTFYQICTKAGLRLVSLAFTMNSSVLGGIVAGVDHEDSLRDVPT
PEESPGVLALKYTTKEFPTVDDVMKGARHIAASKVAAEPNVRKCIRDLYRQHAVMNTEAT
AKGREEIDEFHYCHGLQYIEKMPVLEVFEAGDLWLRIARAEKEGLLTITIINEKAQDLMD
PLEPIYLSNSNASDEEWQSQRHLILQEAINNFLVLSFENELKRDLTVASRDMVVKMCGNA
LRKKLSVRPYEPADGVDPFIVSIWIESTMDSIAHIVALDVNGEMVDKTESYCKRDVTSVD
KLTAALVKFLTEHSQTHVVVINVSAGMKCMDMGGVVDEVRRLLGRDDASRFGNGDGHDFL
DIVFLNDDVANMFSRSKRADQEFPEESEFVRAAVSLGRYLQNPASELCAMWENIALDDPN
RGRELLFLNVHIMQHSLVKDVLLREYDRVFVQMVNKYGVDINLLANHKHTSYQLQFICGL
GPVKAASILNKVRAKNYVERRQELLSKGFVGKIVYRNCAGFIRIRERDALREAPLNPLDD
TRIHPESYYMAVKICGDANNNSTIDMYDPNHYSYAVEDTMYHSASAIRSRNAPQNTRLGD
AEIQDVLSELDLSAYAGRLELQKKGPKLLTLEYIKRELRYPYFDKRAKYQVPKDQELFFL
LNGETRETLRVGMIVPATLLHMSGDDYVRVRLQSGMRSSLHREYLPDYLKDVRPQSFPKG
ITVNAKIVEFKVDREGRYELQLGCDRRSIISMSMCFYPERFPRYTNEKLVESDSMERIDR
LINEPPIDEDKTTFTQASHASRAHSSRRKKRQIAHPLFRNITCQTAMQYLREQPIGEVVI
RPGTQGSDHLTLTWKMLDGVYRHFDIQEKDKPSEARIGQMLIIKEEKYENIDELIARFVD
PMNSLVDDVVHYKHYKNALTESVEEDLIKQKKEHPSRIPYALHVYSKFPGCFSITYIARE
TPRSCHMEVKPGGYRFFGRIESSILPTLSQALQFFKLKALVGPTSNASRPDSYHRNDRSS
GPFAQRSSAPYFGSGGRPRQSSRWSDRRGGDVIARQW
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgatgaaatgtttggtgcaggttcacccacagtgtctgactcagactcagac
gccattaagagagaaaagaatacaaaaaagaagcgcaagataagccgtgatggtagccac
aaaagtaagaaaaaaagcaagagcaaacacgccaagcaatccactagcaacgatgatgct
gacaagaagtcgaaatcgacctttatcgacgacatggcgtcggaaagtgacgacggaaga
gctgaaaaggaagagtcagacgatgacgacgacgaggatgacgaagaaggagaagaccgc
aacgagtacgagaacgacggttttgttgtggatgacacaggctctgacgaagaaggaact
gctcggtaccggcgccgtcgccgcaaaaaagaaaaaaagcttaagcgtctgaaacaaaaa
gtggaagagattgatgacgaggatcttatgctcgtgcgtgaaaatatgggcatggacact
gggcctgcccgtagtgacagcgaagacgaagtgatggaacgctcggctcgcaaagtaaag
actgatgatgatgaatctggactaatgtcacgcgagttgagctaccggatgtttggagac
tcgagtgaggaggaagatttagctccgcaacgcgcgaacaattacttgggcaatgacgag
tacgaaagtgacgacattgatgagtttattgtggatgatgacgaagaaggacgtgaagga
ccacgtcgccgcaggaaacaggagccaattcctgtatccatgcaaggaccttctgtgtac
cagatgggtgaagcggaagagctttttggagacatggatggtttcttagatgcttcaagc
gaaaaaattctcggcaaaacacctgcgaaaccaaaaaaggctaccctgctagagaagttt
gagcctagtgtgctgaaagagcatatgatgaccgccgatgttatcgctgtgcgcgaaaat
gatttgcctgagcgaagccaatatctttataaaagtcgcgattttccggatgccgaagac
cgtgctgaagaatctgagtggatcagtgattttataattaaaaaccttgagagaaggaat
cagcgaagctctgccgcttcgcgcggggagattgtgtcggccattgatactgtcttgcga
ttttaccacgatgaaaagcttgagcccgcgtttgtccagcgatactgtaaggaatattgg
aaagttgtgggtttacacacggagaacttatacgagattcttgatcttgatgtgaagtgg
gacaagctggagcgcaagcggcgatctttccagagtggtattcagcgggtgattgactct
tcgaatgccaaggaatcggcgttcattcgcaaatgctatgagcagctctttggcacaccc
gatgaaaagatttacaaagatttatctgaattttttgcgttggatgcacaggaatcgaat
ggtgacgacaaggagagttcagatcacaagtaccgccgcccggttcgtcggacgttttat
caaatttgtaccaaagccggtttgcgccttgtatctttggcatttacgatgaattcatcc
gtgctcggtggcattgtggctggtgttgatcatgaagactctcttcgtgacgttccgact
ccggaagagagccctggcgttttggccctaaagtacaccactaaggaattcccgactgtg
gatgatgtaatgaagggcgctcgccacattgccgccagtaaagttgcagctgagcctaat
gtccggaaatgtatacgtgatctttatcgtcagcacgctgttatgaatacagaggccact
gcaaaaggccgcgaggaaattgatgaatttcattactgccacggcctgcagtacattgaa
aagatgcctgttctcgaagtgtttgaggcgggtgatttgtggcttagaattgctcgtgct
gagaaagaagggcttttgacgatcaccattattaatgagaaggctcaagatctaatggat
ccgttagagccaatctatttgtcgaacagtaacgcatcggacgaggaatggcaaagtcag
cgccaccttattcttcaggaggcaatcaataatttcttggtcttatcctttgaaaatgaa
ctaaagcgtgacctgactgtggcgtctcgcgatatggttgtaaaaatgtgcggaaatgcg
cttagaaaaaagctttctgtccgaccgtacgagccagctgatggggtagatccctttatt
gtttcgatctggatcgaaagcacgatggactcgatcgcgcacattgtagctcttgatgtt
aatggagaaatggtggataagacggaaagttactgcaagcgtgatgttactagtgttgac
aaacttactgctgctttagtgaagttcctgacggaacattcacaaacgcacgttgttgta
attaatgtctcggcaggtatgaagtgcatggatatgggtggagtagttgatgaagtgcgt
cgcttattagggcgtgatgacgcctctcgctttggcaatggagatgggcacgactttctg
gacattgtcttcttgaatgacgatgttgccaacatgtttagtcgctcaaaacgcgccgac
caagaatttcccgaggaatctgagttcgtacgtgctgcagtcagtctcggacggtacctt
caaaatcctgcatctgagctctgtgcgatgtgggaaaatatagctttggatgatccaaat
cgtggccgtgaattgctatttttgaatgtccacataatgcagcactcactcgtgaaagac
gttcttttaagagaatacgatcgtgtgtttgtgcaaatggttaataagtatggcgttgac
ataaaccttttagccaaccacaaacatacctcgtaccagttgcaatttatctgtggtttg
ggtccagtgaaagctgcgtcaattcttaataaggttcgtgcaaagaattacgtggagcga
cgtcaggaattgttatcgaagggttttgttgggaaaattgtgtatcgcaactgtgctgga
tttatccgtattcgcgagcgtgatgcgctgcgagaagcacccttgaatccgcttgatgac
actcgaatccacccagaaagctactacatggctgtcaaaatttgtggtgacgctaacaac
aattcaactatcgatatgtacgacccaaaccactactcttacgccgtcgaagacacaatg
taccattcagcttctgcaattcgcagccgcaatgccccccaaaatactcggcttggcgat
gcagaaattcaggatgtgctgtcggagctggatttatctgcctacgccggccgactggag
cttcaaaagaaggggccaaagctcctaacgcttgaatacatcaagagagagctgcggtat
ccatatttcgacaagcgtgcaaaatatcaagtaccgaaagaccaagaattgttttttttg
ctgaatggtgaaacacgggaaacgttgcgtgtgggtatgattgtgccggcaacgctgttg
cacatgtcgggtgatgattatgttcgcgttcgtttacaaagtggcatgcggtccagcttg
caccgtgagtatctacccgactatttaaaagacgtgcggccgcaaagttttccaaaaggc
attacagtaaacgccaaaattgtggaatttaaagtggatcgagaaggccgctacgagctg
cagcttggttgcgaccgtcgttcgataatttccatgtccatgtgcttctatcccgagcgt
tttcctcgatatacaaacgaaaagttagtcgaatcggacagtatggagcgcattgaccgc
ctcataaatgagcctcctattgacgaagacaagacaacttttacgcaagcctcacatgct
tcacgtgctcattcttcaagacgtaaaaagcgtcagatcgctcaccctttgttccgcaat
atcacttgtcagacagctatgcaatatttgcgagaacagcctataggcgaggtcgtcatt
cgtcctggcacgcagggttccgatcacttgacacttacgtggaagatgctggatggcgtc
taccggcatttcgatattcaagagaaggataaaccatctgaagcccgcattggtcaaatg
ctgattatcaaggaagaaaagtacgagaacattgatgagctgattgctcgctttgtagat
cccatgaacagtttagtagacgatgtagtgcattacaagcactataagaatgctttaacg
gagagcgtcgaggaggacttaatcaagcagaaaaaggagcacccgtctcgaattccttac
gctcttcacgtatacagcaagtttccgggatgcttttcaattacatatattgcccgtgag
acgccccgcagttgccacatggaggtcaagccgggaggctaccgtttttttggccgaatt
gaatcctcaattctgccgacgctgtcgcaggcgttgcagttttttaagctgaaagcgctt
gtcggtcctacttcgaatgcttctcgtcctgattcctaccaccgtaatgatcgaagcagc
ggacctttcgctcagcgctcgagtgcgccttattttggaagcggtggccgccctcgtcag
tcttcgcgttggagtgatcgtcgtggtggtgatgttattgctcgtcaatggtaa
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integrated database retrieval system
