Bremia lactucae (lettuce downy mildew): 94345151
Help
Entry
94345151 CDS
T10371
Symbol
CCR75_001376
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94345151 (CCR75_001376)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blac03019
]
94345151 (CCR75_001376)
Messenger RNA biogenesis [BR:
blac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
94345151 (CCR75_001376)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
94345151 (CCR75_001376)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF1664
Motif
Other DBs
NCBI-GeneID:
94345151
NCBI-ProteinID:
XP_067814228
UniProt:
A0A976FEA4
LinkDB
All DBs
Position
LG9:<697627..>699471
Genome browser
AA seq
614 aa
AA seq
DB search
MAGQRKLLSEIDRTLKKVSEGVEVFDEIWDKVYAATAQNQKEKHEADLKKEIKKLQRFRD
QIKTWIGNSDVKDKRPLVDARKLIEHKMEEFKVCEKETKTKAYSKEGLAQVERLDPEQQA
RQQSHAWIQDCLTQFNVQIEALESDIERLHSAKGRGRHKGDIEEKEKLLSRHKWHILKLE
QINRLLDNAALEPEQVDELKEDVEYFLEANQEPDFMDTCGDDDIYESLDLDTLGAAAQVA
LPTEQDVGIEDVSVVSVVSSSAATAVATPGRKTPRKSVTSSVITGIGRAGAVKPIDLKNS
TPSRSTSVTKSDMSPLDSNKSEDSKSGKLRTTPQRANSGFSPSEKESNEPPTSVPFSPAA
GTPTAKVSPPTPHRTPTSSISLEHHVGTSSSSSMSPAITTPVSAPSLVVSSAPLPPPVPV
PSPIAPTTTSKPLAASMPAATASGVESTAPTPPVAVAKPEGMVDLLKLTEEQKQVLRLID
ESFHFIPESRDSEKDNRYVPRNLYPTPASFPATPSTLFSSAPIFEKLDVDTLFFIFYHQQ
GSYQQYLAARELKRRTWGYHKKYKTWFKRHEEPQVTGEDYEQGTFVYFDYETGWCQRIKT
EFTFEYSFLEDELQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccggccagcgcaagcttctaagcgagatagaccggacgcttaagaaagtgagcgaa
ggagttgaggtattcgatgagatctgggacaaggtgtacgcggctactgctcagaatcaa
aaggagaagcatgaggcggatctgaagaaggagattaagaaactgcagcgttttcgggac
cagatcaagacatggattggtaattccgacgtcaaagacaagcgaccgctcgtagatgcg
cgaaagcttattgaacataagatggaagagtttaaagtttgcgaaaaggagactaagacc
aaggcttacagcaaggaaggattggcacaggtcgagcgtcttgaccccgaacaacaagca
cggcagcaatcgcacgcgtggattcaggattgtcttactcaatttaatgtgcaaattgag
gcgcttgaaagtgatatcgagcgccttcactcagccaagggccgtggtcgtcacaaaggc
gatatcgaggagaaggagaagctgctgtcccgacacaagtggcatattctcaaacttgag
caaattaatcgacttttggataatgcagcgcttgagcccgaacaagttgatgagttaaag
gaggatgtggaatattttcttgaggcaaatcaagagcccgacttcatggacacgtgcgga
gacgacgatatctacgagtcactggatcttgatacgcttggagctgctgctcaagtggcg
ctgcccaccgagcaggatgtaggcattgaggacgttagtgttgtttctgtggtatcttca
tctgctgcgactgctgtggccacaccaggacgcaagacgccacgcaaaagtgtcacatcg
tcagtaattacagggataggacgcgctggagctgtaaagcctattgacctcaagaattca
acgccgagtcgctcaaccagcgttaccaagagtgacatgtcccctcttgacagcaataag
tcagaagattcgaaatcgggcaagcttcgcactactccacagcgtgcaaatagtgggttc
tctccgtccgagaaagaatcgaatgaaccgccgacttcagtgccattttctcctgctgcc
ggcacgccaacagctaaagtatcgccaccaacaccacatcgtacgccgacttctagtatt
agtctggagcatcatgtgggcacaagctcgtcgtcgtccatgtcaccggcaattaccacc
cctgtttcagccccgtcacttgtggtttcaagtgcgccattgccacccccggtccctgtt
ccttcgccaattgcacctacaactacttcgaagcctttagccgcctcaatgcctgcagcc
actgcctctggagttgaatctacagcaccaacacctccagtggcagtagcgaaaccagaa
ggtatggttgatctgcttaagttgactgaagaacagaagcaggttctgcgattgatcgac
gaaagctttcacttcattcccgagagccgtgactctgaaaaagacaaccgctacgttcca
cgcaatctgtacccgacgccggcgtcattcccggcaacgccgtcaactctgttctcgagt
gcccccatcttcgaaaagctggacgtagacacacttttcttcatcttttaccaccaacag
ggctcatatcaacagtacttggctgcccgcgagctgaaacgacggacatggggttatcac
aaaaagtacaagacgtggtttaagcgccacgaagaaccacaggtgacaggtgaggactac
gagcagggcaccttcgtctacttcgactacgagactggctggtgccaaaggattaagacg
gagtttacctttgagtacagttttcttgaagatgagttgcagtaa
DBGET
integrated database retrieval system
