Bremia lactucae (lettuce downy mildew): 94345219
Help
Entry
94345219 CDS
T10371
Symbol
CCR75_001445
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03013
Nucleocytoplasmic transport
blac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
94345219 (CCR75_001445)
03015 mRNA surveillance pathway
94345219 (CCR75_001445)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blac03019
]
94345219 (CCR75_001445)
Enzymes [BR:
blac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94345219 (CCR75_001445)
Messenger RNA biogenesis [BR:
blac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
94345219 (CCR75_001445)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
94345219
NCBI-ProteinID:
XP_067823852
UniProt:
A0A976IM43
LinkDB
All DBs
Position
LG19:368162..369876
Genome browser
AA seq
452 aa
AA seq
DB search
MEAVATTTAMPAAEEEVVNETVEEVTQSLEDILALGQGLDDEDYKAELEVLQNDPNSNLY
SAVTFEELNLPEQLLKGVYNMKFAKPSKIQSVALPLILANPPENLIGQAQSGSGKTATFA
LGMLYRVDVSLKAPQAVCVGPTRELVRQIMAVVNAMGKFIGVDTFLAIPGNDLARGETLK
AQVIVGTPGKVEGMIKKKQLETRDVKIFVLDEADVMVAEDGMRERSVAIKRFIKNRACQY
LLFSATYADEVRDFAQKMVPDHNIITVKKEKLTLDGIKQFWIDCKSHGNKFQVLSDIFAI
LSIGKCVIFVQQRETAKELTHSMRTNGHSVGILHGADMAKEVRDQVIDEFRAGTTNVLIT
TNVLARGIDVAGVSLVVNFDIPLTRDRRPDPETYLHRIGRTGRFGRKGCAINFVHDDKSK
QDLAEIEEYYARPITQAPSDDIEELEKLLAWE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtagccacgacgacggcgatgcctgcagctgaagaagaggtcgtgaatgag
accgtagaggaggtcacgcagtctctcgaagatattttggcattaggccagggtctggac
gatgaggactacaaggccgagctcgaagtgctgcagaacgatccgaactccaatctttac
tcggctgtcacctttgaggagctaaatctaccagagcagcttctaaagggcgtttacaat
atgaaatttgccaaaccgtcaaagattcaatcagtagcgctcccactcattctcgccaat
ccgccagaaaatctaattggccaggcgcagagcggcagtggcaagacggccacttttgca
ctcgggatgttgtatcgcgtagacgtgagtttaaaggctccacaggctgtttgcgtgggc
cccacccgtgagttagtgcgtcaaattatggctgtggttaacgcgatgggtaaatttatt
ggcgtggacacattcctggccatccctggcaacgacctcgctcgtggggagactttaaaa
gctcaggttattgtgggtacccccggcaaggtcgagggtatgattaagaagaagcagctg
gagactcgtgatgtcaaaatatttgtgctggatgaagccgacgtgatggttgctgaagac
ggcatgcgcgagcgctccgtggcaatcaagcgatttattaagaatcgcgcatgtcagtac
ctgctcttttcagccacatatgcggacgaggtgcgcgactttgcgcaaaagatggtgccg
gaccataatattatcacggtcaagaaggaaaaactcactttagacggtatcaagcagttc
tggatcgattgcaagtcccacggtaacaaatttcaggtgctgtcagacatctttgccatc
ttgagcattggcaaatgtgtcattttcgtacaacagcgcgaaacggcaaaagagttaaca
cacagtatgcgtaccaatggccattccgttggtatcttgcatggcgctgacatggccaag
gaagtgcgtgatcaagtgattgacgagtttcgagctggtacaaccaacgtgctgatcacc
acaaacgtgcttgcccgtggtattgacgtagcaggtgtgtcactggtggttaatttcgac
attccattgactcgggaccgtcgccccgatccagagacgtacctgcaccgtatcggtcga
acgggccgttttggtcgcaagggttgtgcgattaactttgtccatgacgacaagagcaag
caggatcttgctgagattgaagaatactatgcacgcccgattacgcaggcaccttcagat
gacattgaagaacttgagaaattgctagcatgggagtaa
DBGET
integrated database retrieval system
