Bremia lactucae (lettuce downy mildew): 94345245
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Entry
94345245 CDS
T10371
Symbol
CCR75_001471
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
94345245 (CCR75_001471)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blac03009
]
94345245 (CCR75_001471)
Ribosome biogenesis [BR:
blac03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
94345245 (CCR75_001471)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp21
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_TEP1_C
ANAPC4_WD40
DSE1_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
PAC11
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_RIG_2nd
Beta-prop_HPS5
TRM82_WD
Beta-prop_WDR75_2nd
CFAP251_N
Beta-prop_LRRK2
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_WDR35_2nd
KNTC1_N
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
94345245
NCBI-ProteinID:
XP_067823731
UniProt:
A0A976IM19
LinkDB
All DBs
AA seq
1014 aa
AA seq
DB search
MSTDQLIRTQNSRVLQAFRAIGVVTDAVPIVWYGMGKESFATASLGKSFVVYNCDKLSPV
LVSPQLPKRIAALAVQSKQQLTFTACGRQVIVWKRVARIKTLIGHKGGIKQLLTVGNVLF
VLDDEREITVWDLNTMERVHTLSFPTTFTPTVMLHPNTYLNKILLGSEQGSLQLWNIRSK
KCIYEFKGWNSAVTALEQSPAVDVVSIGLADGRLMVHHLQLDERVLDFKHEQKRGVTAMS
FRTDAGAATTPLVVSGSPTGDIAVWNLQTKRLESILAGAHDGAVVSLQFMANEPLLLSTG
TDNSVKMWIFDHVHGGTARLLKSREGHCAPPTRIRYYGNNTLATMADGADGTCCQILSAG
QDRAFRVFHTAREQQSREMSQGPVLKKARHFNVRVETLKLPPIVQFAAIETRARDWANVV
TCHENKVGAYVWRFEHRAIGKKVLQQYDPRNHVVSGSVEDLRRKKTQATSVAISSCGNYA
LVGSLGGSIFRYNMQSGETRGSYPVAATPKAPIIQSLVLPGTDLSTLQDDEAEKTAVNAH
TGPVSAVAVDALNTTLVSAGIDGVLKFWGFQKHELRDEIDVGSPISQMELHRDSNLLGVA
CDDQVLRLYDVATHKLVRRFAGHSHRVTDMTFSSDARWLFSSSADASLRIWDLPTGKCVD
WMRFHKPVTGLAVSPTGEFLATTHVAHVGIFLWANRSFFTDVFFDAEPMAPILMDLPVSL
NEVDNTDQLGVGTERNPQVLMSTEAPDLMKTVEKKEEREPSDPLDASLITLSTAPRAFWQ
SLFNLELIKKRNKPIEPPKAPDKAPFFLQTARKNDVQPTFVPLAAKKKTDVDKDMDIWDA
GDENDSWDIDDGEAPEDDEVIVSSSRILKSEGMVTSRCKLATLLAEAVKKKNEKDLTFAC
YRDVGSYMQSLSASAVDVEMSTLCMGHFDEDGKKLLGWFLDFLRMEMKSHRDFQVLQAYL
NRFLKLHEDLLVANPALLAQVDELGVVQQQQWQHLQKLLHNNLCLVQYLSRIQM
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggatcaattgatccgcactcaaaatagccgcgtccttcaagcgtttcgagcc
attggtgtcgtgactgatgctgtacccattgtatggtatggcatgggaaaggagagcttt
gcaaccgcgtcgttgggcaagtcgtttgtcgtgtacaattgtgacaagctctcgcccgtc
ctcgtatcacctcagctaccgaagcgcatagcagcactcgccgtccaaagcaagcaacag
ctcacattcacggcctgtggacgtcaagttattgtatggaagcgcgtagcgcgtattaaa
accttgataggtcacaaaggaggaatcaaacagctcttgacagtcgggaacgtcctcttt
gtgctcgatgacgagcgcgaaattaccgtttgggaccttaatacaatggaacgggttcat
acgttaagttttccaacaacctttactcctacggttatgctccatccaaacacgtacttg
aacaagattcttcttggttcagaacaaggctcactccagctatggaatattcgttccaaa
aaatgcatttatgagttcaaaggctggaacagtgccgtcacggctttagaacaaagtccg
gcagtggacgtcgtgagtatcggactcgccgatggtcgactcatggtgcatcatttgcag
ctggacgagcgtgttttggactttaaacacgagcaaaagcgcggggtcacagccatgtcg
tttcgaaccgatgcaggtgctgccacgacacctcttgtcgtatctggctcgccaacagga
gatattgccgtatggaacctccaaaccaaacgtctcgagtcaatccttgctggggctcac
gacggtgccgtcgtttcgctccagtttatggcaaatgagccattactgctttccacgggg
acggataattcggtcaaaatgtggatctttgaccacgtgcacggtggcacagcgcgtctt
ttaaagtcacgagaaggtcattgtgcccccccaacgcgaattcgatactatgggaataat
acactcgcaacaatggctgacggtgccgacggcacgtgctgtcaaattctctcagctggc
caagaccgtgcgtttcgtgtctttcataccgctcgggaacaacagagtcgagagatgtct
caaggtcccgtgctgaagaaagcacgtcatttcaatgtccgtgtcgaaacgctcaagttg
ccaccaattgtacaatttgcagccatcgagacgcgcgcacgagattgggccaatgttgtc
acctgccacgaaaacaaagtgggtgcgtatgtatggcgatttgaacaccgtgcgattggg
aagaaagtattgcaacaatatgatcctcgcaatcacgttgtatccggtagtgtcgaagac
ttgcgacggaaaaagacacaggcgacgagcgtcgcgattagctcgtgtgggaattatgcc
cttgttggtagccttggggggtcgatctttcgatataatatgcaatctggtgaaacacgc
ggttcgtatccagtagccgcgacgccaaaggcaccgataattcaatcgcttgtcttacct
ggcacggatctgtcgactttgcaagacgacgaggctgaaaaaacggctgtgaatgcgcac
acgggaccggtgagtgccgtagctgtggacgcattgaatacgactctcgtgtcggctggc
attgatggtgttttaaagttctggggctttcaaaagcatgaattacgagacgagattgat
gtaggatctcctattagtcaaatggagctacaccgggatagcaatttgttaggcgtcgcc
tgtgatgaccaagttttacgtctgtatgacgttgccacgcacaagcttgtgcgtcgtttt
gcgggtcattcgcaccgcgtgacggacatgacatttagctccgatgcacgatggctcttt
tcgtcttccgcggacgcttcgttacgaatatgggatctcccaactggaaagtgtgtggat
tggatgcgatttcacaaacccgtgacgggactcgccgtttctccgacgggggaattcctt
gccacgacacacgtggctcatgtcggtatctttttatgggcaaatcgtagcttctttacc
gatgtttttttcgacgcggagccgatggcacccattttaatggatttgcccgtctcgtta
aatgaagtggataatacggatcagcttggagttggcactgaacgcaatccacaagtatta
atgtcgacggaagcacccgacttaatgaaaacggtcgaaaagaaggaagaacgcgagccc
tcggatccattggatgcgtcattaatcacgctatctaccgcaccacgtgcattctggcag
tctttattcaatcttgaattgattaagaagcgaaacaaacccattgagcctccaaaagcg
cctgataaagctccctttttccttcaaacagcacggaaaaacgacgttcaaccgacattt
gtaccacttgcagcaaagaagaaaacggatgtcgacaaggacatggatatatgggatgct
ggtgacgaaaatgactcttgggatattgatgatggcgaggcgcctgaagacgatgaagta
attgtttctagctcgcgtattctcaagtcggaaggaatggtgacgtctcgttgcaaatta
gccacgttgctggctgaagccgtgaagaagaagaatgagaaagatcttacttttgcatgt
tatcgagacgttggaagctacatgcaatctctatcagcttcagcagtggacgtggaaatg
agcacattgtgcatgggtcactttgatgaggacggcaagaaactgcttgggtggtttctc
gatttcttacgtatggaaatgaaaagccatcgtgattttcaagtcttgcaggcgtatttg
aaccgatttctgaagctgcatgaagatctattggtggctaatccggccttactagcacaa
gttgatgaactcggagttgtgcaacaacaacagtggcaacatttgcaaaaattgctgcat
aacaatttgtgtctggtgcaatatctgagtagaattcagatgtaa
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integrated database retrieval system
