Bremia lactucae (lettuce downy mildew): 94347604
Help
Entry
94347604 CDS
T10371
Symbol
CCR75_003841
Name
(RefSeq) hypothetical protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03030
DNA replication
blac03410
Base excision repair
blac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94347604 (CCR75_003841)
03410 Base excision repair
94347604 (CCR75_003841)
03420 Nucleotide excision repair
94347604 (CCR75_003841)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blac03032
]
94347604 (CCR75_003841)
03400 DNA repair and recombination proteins [BR:
blac03400
]
94347604 (CCR75_003841)
Enzymes [BR:
blac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
94347604 (CCR75_003841)
DNA replication proteins [BR:
blac03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
94347604 (CCR75_003841)
DNA repair and recombination proteins [BR:
blac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
94347604 (CCR75_003841)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
DNA_pol_B
zf_DPOE_2
zf-DPOE
DNA_pol_B_exo2
RNase_H_2
DUF4196
Motif
Other DBs
NCBI-GeneID:
94347604
NCBI-ProteinID:
XP_067823534
UniProt:
A0A976NZU9
LinkDB
All DBs
Position
LG13:complement(2843736..2850926)
Genome browser
AA seq
2396 aa
AA seq
DB search
MPGKRGKSQYGGKSTSRNPYSRGGGSAWARSSQGARANAHRNRRGRGMTEAKLYSLKKGD
ELDKKFGFTLLPELLEQEEEARKEQQWDTTMDGESPAKLGWLLNQRSCTMADPIEGKNEV
SGLELYFLEQDGKAFKTRIIYQPYFYVRPEVNRSQEVLAYCLRQFEGLVAKAERVFREDL
DKADHLNGKKALYVKLSFATVSDLMVVKRELTPLVARNQERLQTRQAYDMQGQAREQVTE
DDLVFKAAGGSGYGPDENESFLIELREYDVPYPMRVAIDLNVRVGAWYRITYNPTAPYSP
SDVIRLTDMVDKAEPVVCAFDIECTKAPLKFPDAQVDQIYMISYMIDRQGYLIVNREFVS
EEIHDFEYTPKAEYPGPFILFNEPNEEKLLKRFFEHVIEEKPHIFVTYNGDFFDWPFIDA
RAQVHGINMAYELGISLDERSGEYRGRCSVHMDAFCWVKRDSYLPQGSQGLKAVTKYKLG
YDPVEVDAEHMLALARDEPMKMASYSVSDAVATFYLYDKYVHLFVFSLCTIIPLGSEDVL
RKGSGTLCEALLMVEAFNGNIICPNKESSGRDEVFYKGHLIENETYVGGHVECLESGVFR
ADFLYDFQLEPSAFQQLIDHIDRDLQFSLEVEMNVPVEQVTNYEEVKKTIADRLAALRDR
PNRKEQPLIYHLDVAAMYPNIILTNRLQPCAIVNEADCAACTFNTECGRAAIKDKEAACQ
REMEWVWRGDFYPATRPEYYSIKTQIEYENFPMEYKGGGLTGENAGQGFSRNPQSTIVPF
AQLASEKQELLLKQRFKSYCSSVYKKTKVTEEQKRSATVCMRENPFYVNTVRAFRDRRYE
YKGLTKGWKKKVTQAAEANDLLAKIDAQNKCLVYDSLQLAHKCILNSFYGYVMRKGARWH
SMEMAGIVTHTGSSIITGARKLVEQIGRPLELDTDGIWAILPKSFPENFSFKLINGSTKT
ISYPCVMLNADVNTKFTNQQYHELDAISGKYTTHSECSILFEVDGPYKAMVLPASTEEGR
LLKKRYAVFNFDHSLAELKGFELKRRGELQLIKAFQSQVFECFLDGANLEECYASVAKCA
NRWLDVIDTRGKSMDTDELMALITENKSMSGKLAEYEGQKSTSITTAKRLGEFLGEDMIK
DKGLTCKMIIAARPYGEKVTERAIPTAIFATEDAVMKHFLKKWLRDPHLQDFDIRSILDW
DYYRTRFASTVQKIISLPAAFQNVRNPVPRIALPDWMRKQVREKNAKHQQGHMKQFFSAI
TKGSENEDYVAQLIDMEDFTIGKQPACFKKPHVKRKRNKCSSVVEDVEDSDDADNLCVSK
VKLGEVPFAEWLKNRKKMWKFMLRKRRREREERMRSYNGVGGFGMANSAHGSAKRFQNGT
SSASASKGNGVGMENFVFDAGSALQREYWQIVEIQQELGGLFTCWVLTAHSQMLQRITLK
LPRIFYIDCDETDHAHFLSLVRGSRRVSRIVPHVSSKPQQLLEVILSEGQYQQFHKEIHQ
ILSDPHVKGVYELHVSALTRAVCALGCVAKVVNPHVSTIKQEYELSDLQLQSTAQVPYLM
DLQPVQRVNATSAPLSTSLLRRVLLYFAQQHKRAILGLVVLKEQDEGNDNERQTLSEGDA
HVWYVDPVSNVKSRNTELSQSFQQILVEAQAEGLPASIQSCSFTTHVVKTAQEAFSGVNA
TLARLASNKQLVPKPTIVVAQTSIPSSNRLREKIQGLHSFPIAMLPWNTEDTLFPALTWR
KLMGEKMLLRWFEMISYYADVVDCARYAHLPVGNFTGDHSIAILDTLYSRILTKHKHLWW
HSPTSLPDLGGKEQEQQFQQLFSQSLLGAAHQTTSDAVSQHRVDTSVVVCDKGSFVEVCV
ELELDGLAVNAILVASQIHSIEGIGGAHQMELDFNQAEDTGTAPAMAIAEGDAEESCHEA
FRLLRIMVTTLFKDFLASQNKFADHLLQHFYRWVSSPDSLCFDPALYAMVKRLMEKLFLQ
LLAEFRRLGAQIVYADFSKLIVCTKKESLHDANAYMNFILQTVLSNELFQVLTFTPTKCV
SNLLFLDAENYGCVLLQNIGPHDNKDKSDCEDHEHESKPLNIVAHWNMANYLPRGVDDYF
LILVGQFIRRRAEFSHSERQKIARKDTDEIKDDDDFFEKDAMHSSPLARYSQKLVASYFS
DKLLRLLPEILRHQMNQDSFPIFVGSHLAMESPALELVKFVTAVFELEPSVEIQVGKMRR
MMLKVLHTSEFSDAAQFRNPSLSFTVQDVICLNCNLCHSVDLCRDPQLFRKSTVSSSNEH
DDEEIKVAIAKAWHCPRCFALYNVAAFEMRLVELIQAQSVAYQLQDLYCIKCHLPAEHKM
REYCPCSGTYALMPGVRESFLETLRLLKRIAQQHHFEQLKEAVQRLGREAVLPLQM
NT seq
7191 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaaagcgcggcaagtcacagtatggcggaaaaagcactagtcgcaatccatac
agtcgcggtgggggctcagcgtgggcacgcagctctcaaggtgcgcgcgccaatgcgcat
cgcaatcgacggggccgcggcatgacggaagccaagctgtattcgctcaagaaaggcgac
gagttggacaagaaatttgggtttactctccttcctgaattgctggagcaagaagaagag
gctcgaaaagagcagcaatgggatactacaatggacggagaaagtcctgcaaagcttggc
tggttactaaaccagcgcagctgtacgatggcggacccaattgagggcaagaacgaagtc
agtggccttgaactgtattttttagagcaagacggcaaggctttcaagacacgcattatc
tatcagccttacttttacgtgcgtcctgaagtcaatcgatctcaggaggttcttgcctat
tgcctgcgacaatttgaaggtctcgtggcaaaagcagagcgcgtttttcgagaggattta
gacaaagccgaccatctcaatggcaagaaggctttgtatgttaaactcagttttgccaca
gtctcggatttgatggtcgtcaagagagaattaacgcccttagtggctagaaaccaggag
cgattacagacacgacaggcttacgacatgcaaggacaagcgcgtgaacaagtgaccgaa
gacgatcttgtctttaaagcagctggaggaagtggctacggtccagatgagaatgagagc
ttcttaatagaattacgagagtatgacgttccgtaccccatgcgtgtcgccattgatcta
aacgttcgagtaggtgcatggtatcgcatcacttataatcccacggccccgtactcgccg
tcggatgtcataagactgacggatatggtcgataaagctgaaccagtcgtctgtgccttt
gatattgagtgtaccaaggctccgctcaagtttccagatgctcaagttgatcagatctat
atgatttcctatatgattgatcgacaagggtatttgattgtcaatcgtgaattcgtgtcg
gaagagattcacgattttgagtatacacccaaagcagagtatccaggcccatttatatta
tttaatgagcccaacgaagagaaactactgaagcgattctttgaacacgtgattgaagag
aagccccatatttttgtgacgtataatggcgacttttttgactggccattcattgatgca
cgcgctcaggttcatggtatcaatatggcatacgaactaggtatttctctcgatgaacgc
agtggcgaatatcgtggacgctgtagtgtgcacatggacgcattctgttgggtcaaacgt
gactcgtatttgccacaaggaagccagggcttgaaagctgtcacaaagtacaagttggga
tacgatccggtcgaagtggatgcggaacatatgcttgcgcttgctcgtgacgaaccaatg
aagatggcgtcgtactccgtatcggacgctgttgccacgttttatttatacgacaaatac
gttcatttatttgtattttcgctgtgtacaatcattccgctgggatcggaagatgtgctt
cgaaaaggatcggggacactttgtgaagctctgttgatggtggaagcttttaacggcaac
attatttgtccaaacaaagagagttctggtcgtgacgaggtattttacaagggccatttg
attgaaaatgagacttatgtgggtggtcacgtcgagtgtctcgagtcgggagtctttcgt
gctgatttcttgtacgactttcagctcgaacctagcgcattccagcaattgattgatcac
attgaccgtgatctacaattttcattagaggttgaaatgaatgttccagttgaacaagtt
accaattatgaggaagtgaagaaaacaattgctgatcgtcttgctgctcttcgtgatcga
ccaaatcgcaaggagcagccattgatatatcacttagatgtcgctgcgatgtatccaaac
attattttaacgaatcgattgcagccgtgcgctattgtgaatgaagctgattgtgctgct
tgcacattcaataccgagtgtggccgggcagcaattaaggataaagaagcggcttgccag
cgtgaaatggagtgggtatggcgtggcgacttctaccctgccacacgacctgagtactac
tcgataaagactcagattgaatacgaaaattttcctatggaatataaaggagggggttta
acgggcgaaaatgcaggtcaaggatttagtcgaaatcctcaatctactattgtccctttt
gctcaacttgcaagtgagaaacaagaattgctgctgaaacagcgcttcaagtcgtactgt
tccagcgtttacaagaaaactaaggtcactgaggagcaaaaacgatctgctacagtttgc
atgcgcgaaaaccccttttacgtgaataccgtgcgcgcttttcgtgatcgccgttacgag
tacaagggacttacaaaaggttggaaaaagaaagtgacacaagctgcagaagcaaatgat
cttttggcaaagattgatgcgcaaaataaatgtcttgtgtatgattccctccagctcgct
cacaagtgtatcctgaattcgttctatggctatgtgatgcgcaagggggctcgctggcat
tcgatggagatggctggtattgtgacacatacaggctcaagcatcattacgggtgctagg
aagttggttgagcaaattggacggccgttagagttagataccgatggtatttgggcaatc
ttaccgaaatcatttcctgaaaatttctcctttaagctcatcaatggcagcacaaaaacg
atatcgtatccatgtgtgatgctcaatgccgatgtcaatacgaaatttacaaatcagcag
tatcacgaattagacgcgatttctggaaagtacacgacgcacagcgaatgctccatctta
tttgaagttgatggtccatataaagctatggttcttccagcctcgacagaagaaggaagg
ttattaaaaaagcggtatgccgtgtttaattttgatcactccttggctgagctcaagggt
ttcgagctgaaacgacgtggtgagttgcagttaatcaaggcttttcagtcgcaagtgttt
gagtgctttcttgatggcgcaaatttggaggaatgctatgcctccgttgcaaaatgtgcg
aatcgatggcttgatgtgattgatacccgaggtaaatccatggataccgatgaattaatg
gcgttaattacagaaaataaaagtatgtcgggtaaattggcggaatacgaaggccagaaa
tcgacgtcaattactactgccaaacgtctaggcgaatttttaggtgaagatatgattaag
gataagggattgacgtgcaagatgattattgctgcacgtccgtacggtgaaaaagtgaca
gagcgagcaatacccacagccatctttgccacagaagatgccgttatgaagcacttttta
aaaaagtggttaagagatcctcaccttcaagactttgacattcgatcaattcttgactgg
gattactatcgcacgcgtttcgcttccacggttcaaaaaatcatatcgcttccagctgct
tttcagaatgtacgcaatccagtacctcgtattgcgcttcctgactggatgcgaaagcaa
gttcgtgagaagaacgccaaacatcaacaaggccacatgaaacaatttttctcggctatt
acaaaagggtctgagaatgaggattatgtggcgcaattgattgatatggaggatttcaca
ataggaaaacaacctgcatgttttaaaaagcctcacgtgaaaaggaagagaaataagtgc
agcagtgtagtagaagacgttgaagacagtgatgatgccgataacctttgcgtgagcaaa
gtaaagcttggagaggtgccatttgccgagtggctaaagaatcgcaagaaaatgtggaaa
ttcatgcttcgtaagcggcgacgtgagcgagaagaacgaatgcgcagttataatggggtc
ggaggatttggtatggccaatagtgctcacggaagtgcgaagcgctttcaaaatggcacg
tcaagtgcatcagcgtcaaaaggtaatggggttggcatggaaaactttgtgtttgatgca
ggaagtgcattacagcgtgaatactggcaaattgtggagattcagcaagaattaggagga
ctgtttacttgttgggtgctgactgcacactctcaaatgctccagcgtattacgttgaaa
cttccacgaatcttttacattgattgcgacgaaaccgaccatgcacactttctttcacta
gtgcgaggctctcgacgtgtgtctcggattgtgcctcacgtgtcgtctaaaccacagcaa
ttgcttgaagtgatcctaagtgaaggacagtatcagcaatttcacaaggagattcatcag
attttaagcgaccctcatgtcaagggtgtgtacgaactccatgtgtctgctcttacgcgg
gccgtatgtgctctcgggtgcgtggcgaaggtggtgaatccacatgtttcaaccatcaag
caagaatacgagctcagtgatctacagctccaatcgaccgcacaggtaccttatctaatg
gaccttcagcctgttcaacgtgtcaatgcgacgagtgcacccttgtcgacctcattactc
cgaagagtactgctgtatttcgcacagcaacataagcgcgcaatacttggactggtcgtg
ctaaaggaacaagatgaagggaatgacaatgagcgacagacactgagcgaaggggatgcc
catgtttggtatgtcgatcctgtctcgaacgtcaagtctcgaaacacggaattatctcaa
agttttcaacagattcttgtcgaagcacaagccgaagggctacctgcttcaattcagagc
tgttctttcacgactcacgttgtcaagacagcgcaagaagccttctcgggtgtcaatgcg
acgcttgctcggctagcatctaataaacaactggtaccaaagccaaccattgtcgtggca
cagacgagtattccgtccagtaaccgccttcgtgaaaagatacaaggccttcatagcttt
cctattgccatgcttccatggaataccgaagatacgctctttcctgcgctcacatggcgt
aagctcatgggagaaaagatgctcttgcgttggtttgagatgatttcttactatgccgac
gtagtcgactgtgctcgctacgcccacttgcctgtaggaaactttacaggtgaccattct
attgcaatcttggataccttgtactcgcgtattttgaccaagcacaaacatttatggtgg
cactccccgacatccctaccagatcttggagggaaggaacaggagcagcagtttcaacaa
cttttcagccaatcgctcttaggagcagcccaccagacgacaagtgacgctgtctctcaa
catcgtgtggacacgtctgtggtcgtctgcgacaaaggttcgttcgtggaggtgtgcgtg
gagctcgagctcgatggtcttgccgtgaacgcaatactcgtggcctctcagatccacagc
attgaaggcattggaggagcacatcaaatggagcttgactttaaccaagccgaagacacc
ggaactgctcctgccatggcaatcgccgagggcgatgcggaagaaagttgtcacgaagcg
tttcgtttgttgcgtattatggtcacgacgctatttaaagatttcttggcaagtcaaaac
aagtttgcagatcacttgctgcagcatttctatcgatgggtctcttcccccgattcgtta
tgtttcgacccagcgctctacgcaatggtcaagcgtctcatggagaagctattcttacag
cttctggccgagtttcgacgcctgggtgcccaaattgtgtatgccgactttagtaaattg
attgtctgcacgaagaaagagtcgttgcatgacgcgaacgcgtacatgaactttatcttg
cagacagtgttgtcgaacgagctctttcaggtgcttacttttactccaaccaagtgcgta
tcgaaccttttgttcctcgatgcggaaaattatggctgcgttttgttacaaaacattgga
ccacacgacaacaaagacaagagcgattgtgaggatcacgagcacgagagcaagccttta
aacattgtagcccattggaatatggccaactacttgcctcgaggagtggacgactacttt
ttgattttagtgggtcaatttattcgtcgacgagcggaattttcgcattccgagcgtcaa
aagattgcaaggaaggacactgatgagataaaagacgatgacgattttttcgaaaaggac
gcaatgcattcgagtccactagccagatattctcaaaagctcgttgcgtcgtatttctcg
gacaaattactacgtcttttgcccgagatattgcgacaccagatgaatcaagacagcttt
cctatctttgtgggctcgcaccttgccatggaatccccggcgctggagcttgtaaagttc
gtgactgctgtgtttgaactcgagccaagtgtcgagatccaagttggcaagatgcgacga
atgatgctaaaagtactgcatacgagcgaatttagcgacgcggcgcagtttcgaaaccca
tcgttatcgtttacagtgcaagacgtcatttgtttaaattgcaatctctgccactcggtt
gatctgtgtcgagatcctcagctttttcgaaaatcgacggtatccagctcgaacgaacac
gacgacgaagagataaaggtcgcaattgcgaaggcatggcattgccctcgctgttttgcg
ttgtacaatgtggcggcgttcgagatgcgacttgtggaattaattcaagcacaatcggtt
gcgtatcagctgcaggatttatactgcatcaagtgtcacttgccagcggagcacaagatg
cgcgagtattgcccatgctctggcacgtatgctttgatgccgggagtgcgtgagtcgttt
ttagaaacactgcggctcctcaaacgcattgcacaacaacatcactttgagcagctgaag
gaagcagtacagcgtcttggtcgcgaagctgtattaccactacagatgtaa
DBGET
integrated database retrieval system
