Bremia lactucae (lettuce downy mildew): 94347750
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Entry
94347750 CDS
T10371
Symbol
CCR75_003988
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
94347750 (CCR75_003988)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blac03019
]
94347750 (CCR75_003988)
Messenger RNA biogenesis [BR:
blac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
94347750 (CCR75_003988)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1797
Motif
Other DBs
NCBI-GeneID:
94347750
NCBI-ProteinID:
XP_067819663
UniProt:
A0A976FPE5
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All DBs
Position
LG18:544701..547375
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AA seq
251 aa
AA seq
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MQNCYFPQPSQRQVPILTDDKLLKRLDNERASADDIRHPYMQLGAVSGASGSAYVEQGRT
RVVCAVYGPRTDTRARREFSKDGQLVCDVKFAPFADKLTRRERGQDPDEMELSAIVEEAL
APAVMLHKLPKCVLSVFVTILEDDGGALAAAINCTSLALADAAVEMYDLVTASSASIVNG
AVVLDPSREEELRGDATMVLAYMPSMGRVTYMLQAGKIVHTQLQEAVDLCTDACRGVTRS
LLTASLVQALS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattgttactttccgcaaccttcgcagcggcaggtgccaattctaacggatgat
aagctcttgaagcgcttggataatgagcgagctagcgctgatgacattcgtcatccctac
atgcagctgggggcggtgagtggtgccagcggctcggcatacgtggagcagggccgcact
cgcgtggtttgtgcggtttacggccctcgaacggatacgcgtgcacgccgcgagtttagc
aaagatggtcaattggtgtgtgacgttaagtttgcgccgttcgccgacaagttgacgcgg
cgcgagcgcggtcaggatccggacgagatggagctatcggctattgtggaggaggcgctg
gcccccgctgtcatgttgcacaagcttcctaagtgcgtcttgtctgtgttcgtgacgatc
ctcgaagacgatggtggagctcttgcggctgccataaattgcacgtccttggcgttggct
gatgctgcggtcgagatgtacgatttagtcacggcgtccagcgcgagtattgtcaatgga
gccgttgtgcttgacccaagcagggaagaggagctacgtggagatgctacgatggtgctg
gcctacatgccatcaatggggcgggttacttatatgttacaggccggcaaaattgtccac
acgcagttgcaagaggcagtggacctctgcacagacgcatgcaggggggtcacgcgatcg
ctgctcacagcgtccctcgtgcaggcactgtcctga
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