Bremia lactucae (lettuce downy mildew): 94348087
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Entry
94348087 CDS
T10371
Symbol
CCR75_004330
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
94348087 (CCR75_004330)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blac03400
]
94348087 (CCR75_004330)
DNA repair and recombination proteins [BR:
blac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
94348087 (CCR75_004330)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
94348087
NCBI-ProteinID:
XP_067818188
UniProt:
A0A976FLD5
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Position
LG6:complement(4404496..4406937)
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AA seq
813 aa
AA seq
DB search
MGGDREEDDSASAESVNDAQTEVAIQIRNEKHLKQVGMALRRPRVRTSCVKGQADEDTKQ
WELMLYSFSDSSELGNLESLLLQTVPTTCYLSAELEQAQGVGDSKKLHALLQTHRVQVIY
KKKNLFTDVSTIETNVARLLGVSTITDYQVMISSKLAAGSLACLIEALDIMADADAFGCY
TLQEGNIMSAMQLDSAAVWSLNLLPERNSTLNGVGRFGGSVLEILNQGKTPMGRRLLERW
IRQPLLDVNQIETRQSLVQLFVDESSLRMELLDECMKALPDLGRLALSLEIMKHAKIADL
VNVYDAALGAMPRVLKLMKTTQVGGDVMLAKLVKNKFVAPLEKVLADLQGFTELVEEVVD
LDSRPTLVVNAKHDQSLQALRDEWDGILVDIEEEHRNALDTIEGDIKCEKDKVRGYVFRV
INKKEEARLSKLPYVHICQVLVSGVQFTTNKLKDLASHYRRVRSEYEERQANLLCAAIDV
ASTYVPVLEAAAATLAELDVLLGFAHAASHAGSGYCRPTLEKDGDCIVLTSARHPCVELQ
DGVDFIPNNYYFEREASRFQLVTGPNMGGKSTYIRQLGTIAVMAQIGSFVPAGIARLPVF
DKLLVRVGAGDLQQRGVSTFMLEMLEASAILQKATKKSLVIIDELGRGTSTYDGFGLAWA
ISEYILTKACSFSLFATHFHELTALEQEHPHGFANKHVTAVASDREITMVYQVQDGPCME
SFGVHVASMAGFPQSVIECAKRKSQKLEGFKNLVGNDTLSGTKRYAEEALLDDSKYVTKN
VAPSKKFLLAFAALPLDTLESTEALRAIRSIAP
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgaccgcgaggaagacgacagcgcttccgcagagtcggtgaacgatgcacag
acagaggtggcaattcaaattcgaaatgaaaagcatctaaagcaggtaggcatggcctta
cggcggccacgcgtacgcacatcgtgtgtcaagggccaggccgacgaggacacaaagcaa
tgggagttgatgctgtattcattttcggattcgagcgagctgggcaacctcgagtcactt
ttgcttcagactgttcccacaacgtgctatctgtcggccgagctcgagcaggctcaaggc
gtaggcgacagcaagaaattgcatgcgctgttgcagactcatagagttcaagttatctac
aagaaaaagaatctattcactgatgtaagcaccatcgagaccaatgtagctagactctta
ggagttagtacgataaccgattatcaggtcatgatatcttctaagcttgcggcaggctcg
ctggcttgtttgattgaagcgctagatattatggccgacgctgatgcctttggctgctat
acgcttcaagaaggcaacatcatgtctgcaatgcaactggacagcgccgctgtttggtcg
cttaatttactcccggagcgtaactctacgcttaatggagttggaagatttggaggcagc
gtgttagaaattttaaatcaaggcaaaacaccaatgggccgacgcctcttggagcgctgg
atccgtcagccactgttggatgtcaaccaaattgagacacgacaaagcctcgtgcagtta
tttgtagacgagtcatcattgagaatggagctgttagatgaatgcatgaaagctttgccg
gacttaggtcgtctcgctctgagtctggagataatgaaacatgccaaaattgcagacctt
gtgaatgtttatgatgcagctcttggtgcaatgccgcgtgtactaaagcttatgaagact
acacaagtaggaggggatgtaatgcttgcgaaacttgttaagaacaagtttgttgcacca
ctagaaaaggtgcttgcggatttgcaaggcttcactgagcttgttgaagaagttgtcgac
ttggacagccgtccaacccttgttgtcaatgcaaaacacgatcaaagtttgcaagcgctg
cgtgacgagtgggacgggattcttgtggatattgaagaggagcatcgcaatgctcttgat
acgattgagggtgacattaaatgtgagaaagataaagttcgcgggtatgtgtttcgtgtt
attaacaaaaaagaagaagcacgactgtcgaagctgccttacgtacacatttgtcaagtg
ctcgtaagtggcgtccaatttacgacgaataaattgaaggatcttgcgtcacactatcgc
cgcgtgcgtagcgagtacgaggaacgccaggcaaatttgctttgtgccgcaattgatgtg
gccagtacatatgtgcctgtcctcgaagctgcggctgctacgctggcagaattggatgtg
cttcttggttttgcgcacgctgcaagtcatgctggctcaggctactgccgccctactctt
gaaaaagatggtgattgtatcgtattgacaagtgcgcgccatccgtgtgtggaactacag
gatggggtggatttcataccaaacaattactactttgagcgtgaggcatcacgctttcaa
ctcgtgacgggtcccaatatgggtggaaagagtacatatatacgccaattagggacaatt
gccgtgatggcccaaattggcagctttgttcctgctggaattgctcgattacctgttttc
gacaaattattagtccgcgttggtgctggtgatctccagcaaagaggcgtttcaacattc
atgctggaaatgctagaggcatctgctatattacagaaggccacaaaaaaatcgctggtt
attatcgatgagcttggtcgaggtacttctacttacgatggatttgggctggcttgggca
atatctgagtacattctcacgaaagcctgctcatttagtctttttgctacgcactttcat
gagctgacagcgttggaacaggaacatccgcatggtttcgccaataagcacgtcacagcc
gtggccagcgatcgcgagatcaccatggtatatcaggtgcaggacggcccgtgtatggaa
agttttggtgtacatgtggcctcaatggcaggatttccgcagtccgtcattgagtgcgct
aagagaaagagccagaagctcgagggctttaaaaacttggtcggcaatgacacgttaagc
ggtaccaagaggtatgcggaagaagccttgctagacgacagcaaatatgttacaaagaat
gttgcaccgagcaagaaatttctgcttgcctttgcagctcttcctcttgatacattggaa
tctactgaggcacttcgggctattcgcagtattgctccataa
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