Bremia lactucae (lettuce downy mildew): 94348852
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Entry
94348852 CDS
T10371
Symbol
CCR75_005098
Name
(RefSeq) uncharacterized protein
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03020
RNA polymerase
blac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
94348852 (CCR75_005098)
09124 Replication and repair
03420 Nucleotide excision repair
94348852 (CCR75_005098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blac03021
]
94348852 (CCR75_005098)
03400 DNA repair and recombination proteins [BR:
blac03400
]
94348852 (CCR75_005098)
Transcription machinery [BR:
blac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
94348852 (CCR75_005098)
DNA repair and recombination proteins [BR:
blac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
94348852 (CCR75_005098)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
94348852
NCBI-ProteinID:
XP_067820130
UniProt:
A0A976FQ83
LinkDB
All DBs
Position
Unknown
AA seq
167 aa
AA seq
DB search
MSSNPQHVVDTEDAAELNLGDDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTY
SYAQRFSGTKDPVANQASVTELREYVANSSSIVHKVALMSLVFQREEDSGMVEYRLEEFE
IACLSNLNPEEVEEAVALIPSLQKRFAEDEIEEILGIVSRTAARMFG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaatcctcaacacgtggtagacacggaagacgcagcagagcttaatctagga
gatgattttcgcaacgagacgtgcctttccaacgctgaagtggccgtgattcttgagaag
cagaagtcggattacgagacacaagagaagcagttgactaatgtatttcagaaaacgtat
tcatatgctcagcgctttagtgggaccaaagatccagtagccaaccaagcttcggtcacc
gagcttcgagagtacgtcgccaactctagcagtatcgtgcacaaagtagctctaatgtca
ctcgtatttcaacgtgaggaggatagcgggatggttgagtatcgacttgaagagtttgaa
attgcctgtctatctaatctaaatccagaagaggtagaagaagctgttgctctcatccct
agcttacaaaagcgctttgctgaagatgaaattgaagaaatattggggattgtctcgaga
acagcagctcgcatgtttggctaa
DBGET
integrated database retrieval system
