Bremia lactucae (lettuce downy mildew): 94349240
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Entry
94349240 CDS
T10371
Symbol
CCR75_005488
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
94349240 (CCR75_005488)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blac03021
]
94349240 (CCR75_005488)
03019 Messenger RNA biogenesis [BR:
blac03019
]
94349240 (CCR75_005488)
Transcription machinery [BR:
blac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
94349240 (CCR75_005488)
RNA polymerase I system
94349240 (CCR75_005488)
Messenger RNA biogenesis [BR:
blac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
94349240 (CCR75_005488)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
Spt5-NGN
KOW7_SPT5
KOW
KOW2_Spt5
KOW1_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
Motif
Other DBs
NCBI-GeneID:
94349240
NCBI-ProteinID:
XP_067820060
UniProt:
A0A976IG57
LinkDB
All DBs
Position
LG1:11771409..11775341
Genome browser
AA seq
1103 aa
AA seq
DB search
MSSSEEELDRNLSEDEDASEDDIPEEEDEEEEETPVKKRKTADSKPKPKKRRKPINKFIE
EEADVDEDEEEEEDEDDDFYRSERQMAEEVEAGHSYRYEPQDRTQFDESESAEAIVNRIK
KRHQQSRKQYDGDEEGGDVIQSEVAQQSLLPSIQDPRMWVFKCKPGREQHLVVALMNKFI
EFARRGEPLMIKSVVASKSKGFIYVEAEREPHAKDCLNGLRDVQQWSMKLVPIHEMTSVL
TVQVRRKPLVTGAWARMKRAGLYKEDLCKVIEILDNGARAVVKLLPRLDPIVLAGGEQPK
YKKGQRPPQKLFHANMVPGADVARRRYPSTGEMMDTFDNDFYQDGFLIKEVNVATMLITD
DVNPTLDEINRFSTVVGGDGENTAEEMLASIESDDWKNKVDLTKGDTVRVIEGDLVNLMG
VVLSTNTANDTVRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGLYSGETGTVVAV
DDGGGAPVAIVLVDSMAREIQVRVRDLQESAEISHGLDSYKGKELYDLVALAHGDVGVIA
HVGRESFTVLCQNGQSRNISDQEVQRKIVSSRTTAALDKKHNHVSVGEMVNVLEGPFSGH
SGTVKHIYRTYLFIHNNRVTTNSGMFVTRARCVVLSGSKARSDMISNSAVPRVGAGMRQQ
NQRGGRFQRESDLVGQTVKVKKGRWKGYIGIVVDESDQKVKVEIHCKAKVVDIDRLHITV
AGTRDGGVIDKPRYAGTPMTGATPLPSQTPLHGSAMTPMATPLHRGMGTPQSSGRGGDAW
HVGNDDALLETQMNQEKDITHATSFGTPLEPTAPSNDMSDSRYINSATQMTPRSPKREGI
MPVIPAANPMTPGLNPATPGLNLSTPGLQPRTPAYMMGHIPTTPGLNPTTPAHVSAATPG
IGHEPISMEPMTPGFNPTTPGLSAMTPSLNPMTPGINTPGYSHNPMTPGFGAATPMGRMN
LAVTPAATPGMMGGTGIPMTPAFNQDSGDLLIGGLASGEVTWKMKGVEVEVLAGESSGSV
GAIISVSSGSCSVDVDGRVVTVSFNDVRPVVPEKQDSVIILSGDEAGSRGSLIGTDASDG
IVKVDGGSEIKIYAIASLAKIAQ
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaagcgaagaggaactggaccgcaatctttcggaggacgaggatgcgtcagag
gacgacattccagaagaggaggatgaagaagaggaggaaacacctgtgaagaagcgcaag
accgcggacagcaagcctaagcccaagaaacgccgcaaacccattaataagttcattgag
gaagaggctgatgttgacgaagatgaagaagaagaagaagacgaagacgacgatttttat
cgctcagagcgccagatggccgaggaagtggaggctggccactcttaccgctatgaacct
caggatcgcacacagttcgacgagtccgagagtgctgaagccattgtcaaccgcattaaa
aagcgccatcaacagagtcgaaagcagtatgatggtgatgaagagggtggcgatgtgatc
caaagtgaagtggcgcagcaatcattactgccatctatacaggatccacggatgtgggtg
ttcaagtgcaagcctggccgcgagcagcatctcgtcgtggcgctcatgaataaatttatc
gaatttgcgcgtcgtggcgagccactcatgatcaaatctgtcgtggcttctaagtccaag
ggatttatttacgtggaggcagagcgtgaaccacacgctaaagattgtctaaatggcctg
cgtgacgtgcagcagtggtcaatgaagctcgttcctatacatgaaatgacttccgttctg
acagtgcaagtacgcagaaagccactagtcacaggcgcttgggcacgaatgaagcgcgca
ggactctacaaggaagatctctgcaaggtcattgaaattcttgacaacggcgcgcgggcg
gtagtaaaactgctcccacggcttgatccgatcgttttggctggaggcgagcagcctaag
tataagaaaggtcaacgtccaccacagaaactctttcatgcaaatatggttcccggagcc
gatgtggctcgtcgacggtatccttcgacaggagaaatgatggatacattcgacaatgat
ttttatcaagacggatttttgattaaggaagtaaatgttgctacgatgcttattacagat
gatgttaatccgactttggatgaaattaatcgtttctcgactgttgttgggggagatggc
gaaaacacagccgaagaaatgctggcgtctattgaatcagacgattggaaaaacaaagtg
gaccttacgaagggtgatacggtgcgggtgattgaaggtgatctggtaaatctcatgggt
gtcgtactgagcacaaatacagccaacgacactgtacgagtcatgccgcttcatgaagag
attaaagatacaattttggatttccagttaaaacaacttatgaagtatgtcaaagtagga
gatcatatcaaggttgtgtctggtttgtactccggcgagactggtactgtcgtggcagta
gatgatggcggaggcgctccagtagccattgtactagtggatagtatggcacgtgaaatt
caagttcgtgttcgtgacttgcaagagtctgcggagatatcgcacggtcttgattcatac
aagggcaaagagctgtacgatctcgtcgctctggctcatggtgatgtaggtgtaattgcc
catgtcgggcgtgaaagcttcacggtgctttgccagaatggccaatcacgaaacatctcg
gaccaagaagtgcagcgcaaaattgtgtcttcgcgcacgacagcggctctcgataaaaaa
cataatcatgttagcgtgggagaaatggtcaatgtgttggaagggcccttttcaggtcat
agtggtacagtgaaacacatttaccgaacctatctatttatccacaacaaccgcgtaacg
acgaactcgggcatgttcgtgacgcgtgcgcgttgtgtggtactttccggtagcaaggcg
cgttctgatatgatctcgaactctgcagtgcctcgagtgggcgccggaatgcgccagcaa
aatcaacgaggtgggagattccagcgtgagtccgatttggtcggccagactgtgaaagtg
aagaaggggcgttggaaaggatacatcggtattgtcgtcgacgaaagcgaccaaaaagtt
aaggtggaaatccattgcaaggcaaaagtcgtggatattgatcgactccatatcactgtg
gcgggcacgcgcgatggtggtgtgatcgacaagcctcgctacgctggtacgccaatgact
ggcgccacgccgctgccgtcgcagacaccacttcacggcagtgccatgacaccgatggca
actccactgcatcgtggtatgggcactccgcaatcttctggtcgtggaggcgatgcttgg
catgttggcaacgatgatgcattgctagagacacagatgaatcaggagaaggatattacg
cacgctactagttttggtactcctcttgaacctacggcgccgtcaaatgacatgtccgac
agtaggtacataaactcagcaactcaaatgactccacgctccccaaaacgagagggaata
atgcctgtaataccagctgcaaacccaatgactcctggactcaaccctgcgacgcctggt
ttaaacttgtcgacacctgggctacagccaagaactccggcctacatgatgggacatatt
ccgacgacgccaggtctaaatccaacgacgcctgcacatgtatcagccgcaactcctggt
atcggtcacgagccgatcagcatggagccaatgactccaggctttaatcccacaacgcct
ggtttgtctgcaatgactcctagtcttaaccctatgacgccaggaataaacactcccggc
tatagccacaacccaatgactcccggctttggtgccgcaactccaatgggtcgaatgaat
ctagctgtgacacctgcggcgacccctggcatgatgggaggcactggcattcctatgaca
ccagcgttcaatcaggattctggcgacttgttaatcggtggacttgctagcggtgaagtg
acttggaagatgaagggtgttgaggttgaggtgctcgctggcgaatctagtggttctgtg
ggtgctattataagtgtgagcagtggctcatgctcagttgacgtggatggccgtgtggtc
actgtttcatttaatgatgtgcgaccagtagtcccagaaaagcaggattcggtaataatt
ctgtcaggcgatgaggcgggctcaagaggatcgctgattggcacagatgcctcggatggt
atcgttaaggtcgacgggggctccgagattaaaatttacgctattgcatccctagcaaag
atcgcacaataa
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integrated database retrieval system
