Bremia lactucae (lettuce downy mildew): 94349575
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Entry
94349575 CDS
T10371
Symbol
CCR75_005829
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
blac Bremia lactucae (lettuce downy mildew)
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blac03009
]
94349575 (CCR75_005829)
Ribosome biogenesis [BR:
blac03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
94349575 (CCR75_005829)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
PEP5_VPS11_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
94349575
NCBI-ProteinID:
XP_067818286
UniProt:
A0A976FL41
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Position
LG6:complement(4740242..4744288)
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AA seq
516 aa
AA seq
DB search
MKSNGKIKHVDKYTRGRGVSVRGIRDKKLKGSLQRADERQKLAAESAAKSEILLPDKAGL
LEAEGLEKTYKFSQKQLAENVDINTAHKIFSLSLPDYGSYCVKYTRNGRNMLLGSQKGHL
VQMDTLRMKLTCELQANDLVRDVTFLHNDSLFAVAQKKHVYIYDSTGAEAHCIRTIPQPR
KMEFLPYHFLLSCVSGNGLLTYHDVTIGKQVSTHRTKQGLCDTMALNPWNAVVNLGHASG
IVTLWTPNMSDAVVKMQCHQGPIRSMGIDNSGNYLITAGADRKVKVFDLRKYQELNNYYL
SAAANTLSVSQRGLVAVGFGPNVHVLKGTYSSSSPIRPYMTHQIPGSMIASVAFRPFEDV
LGVGHATGFNSIVIPGSGEPNFDTYEANPFENHKQRDESEVRSLLEKIRPEMITLDPNAI
GRVDMDPVDEQEKKIHQMRLANGDDMLKKTKKKMRGKNRPSRRLRKKQQNVVDAQKQQFR
EQLMSKRKRKERQEQQREWNDKAESAPTALNRFFKK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgaatggtaagatcaagcatgtggacaagtacacgcgcgggcgtggcgtttct
gtccgtggcattcgggacaagaagctaaagggatccctacaacgggctgatgagaggcaa
aagttggcggctgaatccgccgctaagtctgagatccttcttcccgacaaggctggttta
ctagaagccgaaggtcttgagaagacctacaaattttctcagaagcagctcgcagaaaac
gtggacattaatacagcacacaagatttttagcctaagcttacctgactacggctcgtac
tgcgtcaagtatacgcgcaacggccgcaacatgttgcttggcagccagaagggccatcta
gtgcagatggatacattgcgcatgaagcttacttgtgaacttcaagctaatgaccttgtc
cgtgacgtaacttttttacacaacgactctctcttcgctgtggcgcaaaagaaacacgta
tacatttatgatagcacgggtgccgaagcgcattgtatccggactattccacaaccgcgg
aagatggaatttctcccctatcatttcctactgtcgtgtgtaagcggcaatggattgttg
acctaccatgatgtaacaataggaaagcaggtgtcgacacaccgtacgaaacagggtttg
tgtgataccatggcattaaatccatggaacgctgttgtaaatcttggccacgccagtgga
attgtaaccctatggacgcccaatatgtcggatgccgttgtcaagatgcagtgtcaccaa
ggaccaattcgctcaatgggcattgacaacagtgggaactatctcattacggctggtgcc
gatcgaaaagtgaaagtatttgacttgcgtaaataccaggagcttaacaattactaccta
agcgcagcagccaatactctgagcgttagtcagcgtggacttgttgcagtaggctttggc
ccgaacgtccacgtgctcaaaggcacatactcgtccagctcacccatccggccatacatg
acccaccagattccaggatcaatgatcgcatcggtggcatttcgtccatttgaggatgtg
ctgggagtaggtcatgcaaccggctttaactcgatcgtgattcctggctccggtgagcct
aactttgacacatatgaggcaaatccatttgagaatcacaaacagcgggacgaatctgaa
gtgcgctcgctgttggagaaaattcgtccagaaatgataaccttagacccaaacgccatc
gggcgtgtagacatggacccagttgacgagcaggaaaagaagatccaccaaatgagactt
gccaatggcgatgacatgttaaaaaaaaccaagaagaagatgcgtggcaagaatcgcccc
tcgcgacgactacggaagaaacagcaaaacgttgttgacgcacaaaaacaacagtttcgc
gagcaattgatgagcaaacggaaacgcaaagagcggcaggaacagcagcgcgagtggaat
gataaggctgagagtgcgccgacggcactaaatcgtttctttaaaaagtag
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