Bremia lactucae (lettuce downy mildew): 94350924
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Entry
94350924 CDS
T10371
Symbol
CCR75_007190
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03030
DNA replication
blac03410
Base excision repair
blac03420
Nucleotide excision repair
blac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
94350924 (CCR75_007190)
03410 Base excision repair
94350924 (CCR75_007190)
03420 Nucleotide excision repair
94350924 (CCR75_007190)
03430 Mismatch repair
94350924 (CCR75_007190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blac03032
]
94350924 (CCR75_007190)
03036 Chromosome and associated proteins [BR:
blac03036
]
94350924 (CCR75_007190)
03400 DNA repair and recombination proteins [BR:
blac03400
]
94350924 (CCR75_007190)
DNA replication proteins [BR:
blac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
94350924 (CCR75_007190)
DNA Replication Termination Factors
ELG1-RFC complex
94350924 (CCR75_007190)
Chromosome and associated proteins [BR:
blac03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
94350924 (CCR75_007190)
DNA repair and recombination proteins [BR:
blac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
94350924 (CCR75_007190)
Check point factors
HRAD17(Rad24)-RFC complex
94350924 (CCR75_007190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
Mg_chelatase
AAA_22
AAA_14
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_11
AAA_19
RuvB_N
nSTAND3
DNAX_ATPase_lid
AAA_5
AAA_assoc_2
IstB_IS21
bpMoxR
AAA_30
AAA_24
ABC_tran
AAA_25
AAA_3
MeaB
AAA_18
Gp44_lid
AAA_28
NTPase_1
AAA_7
NPHP3_N
RsgA_GTPase
KTI12
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
94350924
NCBI-ProteinID:
XP_067816007
UniProt:
A0A976IBZ1
LinkDB
All DBs
Position
LG7:complement(343907..344890)
Genome browser
AA seq
327 aa
AA seq
DB search
MSDDFEAPWVEKFRPRLLADVVGNRDTIASLQAMAIAGNMTNLILSGPPGTGKTTSILCL
ARELLGPNLKQAVLELNASDDRGIDTVRSKIKMFAQQKVTLPPGRHKIVILDEADSMTAA
AQQALRRTMEIFSATTRFALACNNSTKIIEPIQSRCAILRFTRLPDEMLLRRLLTVCQQE
NVAYHEDGLAALIFTAEGDMRNALNNLQATASGFNFVSDENVFKVCDQPHPAVVREILNC
CEKGEIDGAENRAIELWKSGYSSLDIIGTVFRVCKALPMENEKLKLEFIKLIGATHMCIA
DGVSTLLQIHGLVARMCSAALAAKAEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatttcgaggcgccatgggtggagaagttccgtccgcgccttctagcagac
gtcgtgggtaaccgggatacaattgcaagtctccaagccatggcaattgctggaaacatg
acaaatctgatcctttctggtccgccaggcaccggaaagactacaagtattttatgtttg
gcgcgcgagctgctcggtcccaatctaaaacaagcggtgctggaactcaatgcgtccgac
gaccgtggaattgacacggtccgcagcaaaattaagatgtttgcgcagcagaaggtgacg
ctcccccctggccgccacaagatcgtgatcttagatgaggcggactccatgaccgctgca
gcccagcaagcactgcgtcgaacgatggagatcttctccgccactactcgttttgctcta
gcctgtaacaattcaaccaagatcattgagcccattcagagtcgttgcgcgattctgcgc
tttacgcggctgccagacgagatgctgctacgtcggcttctaacggtctgtcagcaggaa
aatgttgcctatcacgaagacggactggcggcgcttatatttacggcagagggcgacatg
cgcaatgcgctcaataatcttcaagctacagccagtggatttaattttgtcagtgacgag
aatgttttcaaggtctgcgaccagcctcaccctgctgtggtgcgagaaattttaaattgc
tgtgagaaaggagagatagatggggccgagaaccgcgcgattgaattatggaagagtggg
tactcgtccctagatattattggaacggtctttagggtctgtaaagcgctgccgatggag
aacgagaaactcaaactagaatttataaagctgattggtgctacgcacatgtgcattgct
gatggagtgtcgacgctgctgcagattcatgggctcgtggcacggatgtgttcagccgcg
ttggctgccaaggcagaagcttaa
DBGET
integrated database retrieval system
