Bremia lactucae (lettuce downy mildew): 94351402
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Entry
94351402 CDS
T10371
Symbol
CCR75_007673
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
94351402 (CCR75_007673)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blac03019
]
94351402 (CCR75_007673)
Messenger RNA biogenesis [BR:
blac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
94351402 (CCR75_007673)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
94351402
NCBI-ProteinID:
XP_067823088
UniProt:
A0A976IKP6
LinkDB
All DBs
Position
LG1:<3024081..3028997
Genome browser
AA seq
1537 aa
AA seq
DB search
MLPPPSKQNRNSRPLVAMELSAQAERTFKGLSDVKTRVDQATQEDASFPDLADQLNAQSE
PQNYFLEPYASQWTPQVAKKGSIIPLPSVVAAALDEVKTLTLSGLLPEIRSAWTSVDARL
FLWSYAQRGRFATKEFDQAIVAVGLVIRPATGVFTSKVQHVLVVATTVEVILLAVVIDEG
QSEPLNFKLQPTKLSVSTDKCVVRKIVTTRCGRIFFGGSDGALYEILYAPDQKAAADRKS
ILGAALKNVPGVGISEGCRKVAHTFSYAQYLPRFLAGLASAPGKVVDICVDHTRNILYIL
HDDAQLSVFDLGTNGEESKAICTSHLLTDGAKYARENRRTRVSCPDERLFQPAVVGTSNS
LKVVALATVAPDESKIVTLVAITSNGMRFYLTVFSRRYAYAGAGSRPKRPSRLEIIHIRL
PPPAMTLRDAPPYHAKEGMQPGYVPGKSPSAVHVAFHRKGVFLCIEGRRDQQDELVSIAH
DPISTTALSVQSILTARKTTIRESVFLDTCIGKVVDIQELDPYSSEGPESTWKDETQASA
TAKEISSGSKRSFDEMDTGISAFSAADNAIVFGEMSLMYSQPSRHFLCLTSSGIQVFKKI
RPLDQLHRVLLLARGHELKAQLAPFVRYFGEIQVICMLFALACGVQTDPLVTEMSTAISL
IAPRPGGLSTMKSEDYLYTAAVQSIFELAQGPPDNVPSEPATYASNGTTVSSTNTRVVLT
TEFAMSYQHDGLVAFASRVLRPLWIPKTLGRQITSRVADGATSTTTSANYVTRFEYVQPP
EKLDEIRELLFQLRQLMETAGPFAVSIKCGAALENNPSLDGVLGENVEAGLSRVSELVMR
HQKALSEDQLKRETRYKAEQRSVYYLHQLVLRSIEAISLLRIAQEYKVSLEEPLACLNFS
DLVTTTDGALAAKTMTKALMRDRNENNQILIKQLREQCPIFFSVSDLWHYQGYRSLSNAK
LSGSPVARQKLLNESLEQFLSSCHMWDTEDSLDVLQGICEDYTFLNYYEGLVKLSLACAK
HFHDAAASDLSGVKEAWKRRCFGCILLALHKLLGEDTASASPQAVEEMIMLDDDSRTKYI
EELFHYALTSEDESFHNLLYTWLYERGHTNLLTAIRSPYIEDFLKTKDQDLLIKLYMDQQ
KYLVAAKIWWARAHEDTLGDDEYTNSFAVVVAKNPDIVKRQYYVSKALNCLKSLENVGEA
SEAIQEVRDVLDVLQLHVRVLKALEQQVIELETSSLSSEENLQNRKTDLQLLTFRLFDAT
TLYNRFAHKFDMWTECLHIIHVCKSEEGDVIATLWRKIIFSMLPQSSNNAAFNAWRLDQC
EKAGLLATSTSSTMNSSFESGNWIGQMQCKLLRLGKSLYWEGDDRRGGSAVGTGDIVFPV
GFLADTLEWVSLWYIRSTGMGAFTGSIASAAAIDATTFNWVLKLFLDVGVPHRVLLSHYD
QVYHEQPDHLYREGWTLHLLQSILAIINIWKKHAMSPRAEKDQLADFAAYCPNIVDLCDG
FITDLRATSLDEDGEATTLLVQFRRVKSELVNIRTFM
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgctccccccgccatcaaagcaaaatcgcaactcgcgcccactcgttgccatggagctg
tcggcgcaggccgagcgtacgtttaagggcctttcggacgttaaaacacgcgttgaccaa
gccactcaagaagatgcttcgtttccggatcttgcggaccagctgaatgcacagtccgag
ccgcagaattattttctagagccttatgcgtctcagtggacgccccaggtagccaaaaag
ggttctattattccactgccaagcgtggttgctgccgcattagatgaagtcaaaactctt
acgctctctggtctattaccagagatccgctcagcctggacgtctgtggatgctcgtctt
tttctatggagctacgcccagcgcggtcgctttgcgaccaaggagtttgaccaggccatt
gtagccgtcgggctcgtcattcgtccagctactggcgtattcacatctaaggtccagcat
gtgctagttgtggccactacggtggaggtaatcttactggcggtcgtgattgacgaaggt
cagtcggagcctcttaatttcaagctacaacccacgaagcttagtgtcagtactgacaag
tgcgtcgttcggaaaattgttacaacacgctgtgggcgtatcttttttggtggatccgat
ggggcactatatgaaattctgtatgcaccagaccaaaaagctgctgctgaccgcaaatca
atccttggagcagcactgaaaaatgtccctggagtaggtatatccgaaggctgtagaaaa
gtggcccatacatttagctacgcacagtatctgccgcggttcttggccgggttagccagc
gctcctggtaaagttgtggatatatgtgtggaccacacccgaaacatcctttatatcctt
catgacgatgctcaattgagtgtctttgacctaggaactaacggagaagagagcaaagcc
atttgtacgagccacttgctgaccgacggtgccaagtacgcacgcgagaatcgccgcacg
cgcgtatcgtgcccggacgaacggctgtttcagccggccgtagttggtacatctaattcc
ttaaaggttgttgctcttgcgacggtggcacctgatgaatcaaagattgtgacactcgtt
gcgattacatcaaacggtatgcgcttttatttaacggtcttttcaagacgatatgcgtat
gcaggggctggcagtcgacctaaacgtccgtctagactcgaaattatacacattcgtcta
cctccgccagcaatgacgttgcgcgatgccccgccataccacgccaaagaaggcatgcag
ccgggttatgtgcctggtaagagtccaagcgccgtccacgttgcatttcatcggaagggt
gtatttctatgtattgaaggccgacgagatcagcaggacgaactcgttagcattgctcat
gaccctattagtaccacagctttatctgtacaatcgattttgactgcaagaaagactacg
attcgagaatctgtgtttttggatacttgtattggcaaagtcgtggatatccaagaactc
gatccctattcaagtgagggacccgagagcacgtggaaagatgaaacccaagccagtgct
actgcaaaggaaattagtagtggcagtaaacgctcatttgacgaaatggatactgggata
tctgcatttagtgccgcagataacgccatagtctttggtgagatgtctctcatgtattcg
caaccatcgcgacacttcttgtgcttaacaagctcagggattcaagtttttaaaaagatt
cgtccactggatcagctgcatcgcgtgcttttacttgctcgtggtcatgaactcaaggct
caactcgcgccttttgttcgttattttggagagattcaggtcatttgtatgctctttgct
ttagcttgtggtgtgcaaacggatccgctcgttacggagatgtcaacagcgatttcgcta
attgcaccgcggcctggtggcttatccaccatgaaaagcgaagattacttgtacacggct
gcagtgcagagcatatttgagcttgcacagggaccacccgataatgtgccatcagagcct
gcaacatatgcttcaaacggcactacagtctcttctactaatacgcgggtcgtcttgact
acggaatttgccatgtcgtatcaacacgacggtcttgtagcattcgcgagtcgtgtcctg
cgtccactctggattcctaagacgcttggccgacagattacttctcgtgtcgctgatggt
gccacgtcgacaacaacgtcggcgaattacgtgacgcgctttgaatatgttcagcctccg
gaaaaattagacgagattcgcgaacttctttttcagctgcgacagcttatggagactgcc
ggtccatttgccgtctcaattaagtgtggcgccgccctcgagaacaacccaagcctggac
ggtgtgttgggcgaaaacgttgaggctggattatcccgtgtatcagagctcgtgatgcgg
caccaaaaagcactcagtgaggaccagctcaagcgcgagacgcgatataaagctgaacaa
cgatctgtgtactatttgcaccagctagtgcttcgaagtatcgaggcaatatcactatta
cggattgctcaggagtacaaagtctcgctcgaagaaccccttgcttgccttaatttcagc
gatttagtgacaacgacagatggggcgctagctgccaagaccatgacaaaggctttaatg
cgtgatcgcaacgaaaacaaccagattttgatcaagcagctacgtgaacagtgtcccata
ttcttttccgtgtcggatctgtggcattaccaaggatatcgaagcttgtctaatgctaag
ctcagcggttcgcctgttgcccgacaaaaattattaaacgagtcgcttgaacaatttcta
agctcgtgtcacatgtgggatacggaggattcccttgacgtgctccaaggtatatgtgaa
gactacactttccttaactattacgaaggtctcgtgaagttgtcactagcgtgcgctaaa
cactttcatgacgctgcggcatcggatcttagcggtgttaaagaagcgtggaaacggcgg
tgctttggctgtatcttgctggccctgcacaagcttttgggtgaagacacagcgagcgct
agtccacaagctgtcgaagaaatgataatgctggatgacgactcgaggacgaagtacatt
gaagaactatttcactatgcactgacctcagaagacgagagcttccacaaccttttgtac
acgtggctttatgagcgtggacacacgaacttgctgacagcgattcgttccccgtacatc
gaagatttccttaagacaaaggaccaggacctgcttattaagctctacatggaccagcag
aaatacctcgtggcggccaaaatctggtgggctcgtgctcatgaggatactttgggagac
gacgagtatacaaattcattcgctgtggttgtcgctaagaatcccgatattgtcaagcga
cagtattatgtgtctaaggcactgaactgcttaaaaagcttggaaaatgtgggcgaagct
tctgaggccattcaggaagtacgcgatgtactggatgtgcttcagttgcatgttcgtgtg
ttaaaggcattggagcagcaagtgattgaattggaaacgtcttctttaagctctgaggaa
aatttacagaatcgaaagacggacttgcaactcttgacatttagattgtttgacgcgacg
acgttgtataatcgatttgcgcacaagttcgacatgtggacagagtgtctgcatattatt
cacgtgtgcaagtcagaagaaggcgatgtgattgcaaccttgtggcgaaagataattttt
agtatgttgcctcaatcttctaataatgcagcatttaatgcgtggcgactggaccagtgc
gagaaggctggacttctcgcgacgtcaacgagttcaactatgaattcttctttcgaaagt
ggcaactggattggccagatgcagtgtaagttattgcggctgggcaagtctttatattgg
gaaggggacgaccgacgtggtggctcggctgttggcacgggagatatcgtgtttcccgtg
ggatttcttgctgatacgctcgagtgggtatcgctttggtatattcggtcgaccggcatg
ggtgcgtttactggaagcattgcttcggccgctgctattgatgccaccacattcaattgg
gtacttaagctctttctagacgttggtgtgccgcaccgagtattgctgagccattatgat
caagtctaccatgaacagcctgaccatctttaccgagagggttggacattgcatttgttg
caatcaatactggccattataaacatttggaagaagcacgcgatgtcgccaagagcagag
aaggaccaactcgcagattttgcagcctactgtccgaacatcgtcgacctctgtgacggc
tttatcacggatttgcgtgctacgtcacttgatgaagacggagaggccacaactttgctg
gttcaatttcgccgggttaaaagtgaactcgtaaatattcggaccttcatgtag
DBGET
integrated database retrieval system
