Bremia lactucae (lettuce downy mildew): 94351739
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Entry
94351739 CDS
T10371
Symbol
CCR75_008013
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03082
ATP-dependent chromatin remodeling
blac03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
94351739 (CCR75_008013)
03083 Polycomb repressive complex
94351739 (CCR75_008013)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
blac03036
]
94351739 (CCR75_008013)
Chromosome and associated proteins [BR:
blac03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
94351739 (CCR75_008013)
Histone modification proteins
HAT complexes
HATB complex
94351739 (CCR75_008013)
HDAC complexes
Sin3A-HDAC complex
94351739 (CCR75_008013)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
94351739 (CCR75_008013)
PRC2.2
94351739 (CCR75_008013)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
94351739 (CCR75_008013)
Heterochromatin formation proteins
Other heterochromatin formation proteins
94351739 (CCR75_008013)
Chromatin remodeling factors
NuRD complex
94351739 (CCR75_008013)
NuRF complex
94351739 (CCR75_008013)
NuRF complex (fruit fly)
94351739 (CCR75_008013)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
MIOS_WD40
WD_LRWD1
Beta-prop_DCAF4
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
RMC1_N
Beta-prop_TEP1_C
PglD_N
Motif
Other DBs
NCBI-GeneID:
94351739
NCBI-ProteinID:
XP_067814953
UniProt:
A0A976FFD2
LinkDB
All DBs
Position
LG1:complement(12770157..12771887)
Genome browser
AA seq
438 aa
AA seq
DB search
MADTTDHPETAASAVDVAAASDAALQEKLINEEYKIWKKNTPFLYDLVMTHALEWPSLTV
QWLPSSHTSAGDDFSVHKLLLGTHTSGAEQNHLMVAEVRLPLEDTEIDARKYDEESQELG
GFGGVSGKVDIKIRVNHDGEVNRARFMPSDELVVASKTPHAEVHVFDISKRPSQPEPNSS
CDPDFRLLGHTKEGYGLCWDPHQPFHLISGSDDAIICEWDLGNTSKTVQPLRKYSGHSDV
IEDVAWHMHNSKIFGSVGDDKKLLIWDMRSESYDKPATTVYAHTAEVNCLAFSPFSEYLV
ATGSADKHVNLWDMRNMKAKLHSFEGHNDEVYQIQWSPHNETILGSCSADRRMHVWDLSK
IGDEQSPEDAEDGPPELLFIHGGHTSKISDFSWNLNDPWVVASVAEDNVLQIWQMAENIY
NEEGDETEQADIAEEDLE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccactgaccacccggagacagcagcatctgccgttgacgtggcagccgcc
agcgatgctgctttacaggagaagctcattaatgaggaatataaaatatggaagaagaat
acaccatttctatacgacttggtcatgacgcacgcgctcgagtggccgtccttaaccgtc
cagtggctcccgagttcccatacgtcagcgggtgatgatttctcggtgcataagctacta
cttggaacgcacacgtctggtgcagaacagaaccatctgatggtggcggaagttcgattg
ccgttagaagacacagaaattgacgctcgaaaatacgacgaggagagtcaggagctgggt
ggctttggtggtgtatcgggtaaggtggacatcaagattcgcgttaatcacgacggtgag
gtgaaccgcgcacgctttatgccttccgatgaacttgtcgtagctagcaagacccctcat
gctgaggttcacgtttttgatatttcaaagcggccatctcagcccgagccaaattcaagc
tgcgacccggactttcgcctccttggccatactaaggaaggttatggtctctgctgggac
ccccaccaaccttttcacctaatatcgggctcggacgatgcaattatctgcgagtgggac
cttggcaataccagtaaaaccgtgcagccgctgcgcaagtacagtggacacagcgatgta
attgaggatgtcgcgtggcacatgcacaactccaaaatctttgggtcggtcggtgacgac
aagaaattgctcatctgggatatgcggtcggagagctatgacaagcccgcgacgaccgtg
tacgcgcacactgctgaagtcaattgccttgcttttagtccatttagcgagtacctcgtt
gcaacgggttcagcagacaaacacgttaatctttgggacatgcgcaacatgaaggcgaag
ctgcactcgttcgagggtcacaatgatgaagtctaccagattcaatggtcgcctcataat
gaaacgattctcggttcctgctctgctgaccgccgtatgcacgtgtgggaccttagcaag
attggagacgaacaatcgcctgaagacgccgaagacgggccccccgagctgctatttatt
cacggcggccacacttccaaaatctcggacttttcgtggaacctcaacgacccttgggtg
gtagcgtcggtcgcggaagataacgtcttgcaaatttggcagatggcggagaacatatac
aatgaagaaggcgacgagactgagcaggcggacattgccgaggaagaccttgaatag
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