Bremia lactucae (lettuce downy mildew): 94352105
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Entry
94352105 CDS
T10371
Symbol
CCR75_008382
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03082
ATP-dependent chromatin remodeling
blac03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
94352105 (CCR75_008382)
03083 Polycomb repressive complex
94352105 (CCR75_008382)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
blac03036
]
94352105 (CCR75_008382)
Enzymes [BR:
blac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
94352105 (CCR75_008382)
Chromosome and associated proteins [BR:
blac03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
94352105 (CCR75_008382)
HDAC complexes
Sin3A-HDAC complex
94352105 (CCR75_008382)
BRAF-HDAC complex
94352105 (CCR75_008382)
REST complex
94352105 (CCR75_008382)
SHIP complex
94352105 (CCR75_008382)
MiDAC complex
94352105 (CCR75_008382)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
94352105 (CCR75_008382)
Heterochromatin formation proteins
Other heterochromatin formation proteins
94352105 (CCR75_008382)
Chromatin remodeling factors
NuRD complex
94352105 (CCR75_008382)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
94352105
NCBI-ProteinID:
XP_067822505
UniProt:
A0A976IJI5
LinkDB
All DBs
Position
LG1:7058637..7064343
Genome browser
AA seq
429 aa
AA seq
DB search
MSSGSMALTSGGTVAAKRRVAYFYDSEIGNYHYGQNHPMKPHRVRMAHNLITNYGLTKHM
EVFRPRMVDWTELTRFHSDDYIHFLRLVTPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQ
LYASASIGGAAKLNSGSADIVINWSGGLHHGKRSEASGFCYVNDCVLGILELLKTHQRVL
YIDIDIHHGDGVEEAFYTTNRVMTCSFHKYGEFFPGTGDIKDIGHGDGKHYAVNFPCRDG
MDDESFTGIFRSVISKVMEHFAPGAVLLQCGTDSLSGDRLGSFNLSAKGHADCVSYVKSF
NMPTLVVGGGGYTLRNVARAWCYESSLLVGVDIPDAMPYNDYFEYYGPEYRLHLPIKRQI
HENLRQIEPVPSVPFMVAPQSGSIQEEKEAIARDCEEDDQHMMDVSGDNQLRQELRQSDA
PQHAVEFFD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggttccatggcactcacaagcggcggcactgtcgctgctaagcgccgtgtc
gcctacttttatgactccgaaattggtaactaccactacggccagaatcatcccatgaag
ccgcaccgcgtccgaatggctcacaaccttatcaccaattatggcctcacgaagcacatg
gaagtttttcgccctcgtatggtagactggaccgagctcactcgctttcactcagatgat
tatatccacttcttgcggcttgtgacgcccgacaacatgcacgagtacctgcgccagctc
caacgctttaacgtgggcgaggattgtccagtgtttgacggtctttttgaattttgccag
ctctatgcgtcagcttcgataggcggtgctgccaagctaaactcaggctccgcggacatt
gtcattaattggtcggggggtcttcaccacggcaagcggtcggaggcttctggtttttgc
tacgtaaatgactgcgtgcttggtattctggagttgcttaagacccaccagcgcgtgctt
tacattgatattgacatacaccacggcgatggcgtagaggaggccttctacacaacaaat
cgtgtaatgacatgctcatttcataaatatggcgaattttttccaggtacgggagatatt
aaggatattggtcacggagatggcaagcactacgcagtgaactttccatgtcgcgatggt
atggacgacgagagctttacaggcatatttcgtagcgtgatttccaaggtgatggagcac
tttgcgccaggagctgtcttgttacagtgtggcacagactcgctctctggtgatcggctt
ggtagctttaacttatcagctaaaggccacgcagactgcgtatcgtatgttaaaagtttt
aacatgcccacactagttgttggtggtggtgggtatacgcttcgcaatgtagcccgtgcg
tggtgctacgagtcttcgctgctcgttggcgttgacattcctgacgcgatgccttataac
gattactttgaatactatgggccggagtaccgtttgcacttgcccatcaagcgtcagatt
catgagaaccttcgccagatcgagcctgttcccagcgtgccttttatggtcgccccacag
tcaggcagtattcaagaagaaaaggaagcaattgcgcgcgattgtgaggaagatgatcag
cacatgatggatgtttcgggggataatcaacttcgtcaagagctcaggcagagcgatgct
ccccagcatgcagtcgaattttttgactaa
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