Bremia lactucae (lettuce downy mildew): 94352523
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Entry
94352523 CDS
T10371
Symbol
CCR75_008803
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
blac Bremia lactucae (lettuce downy mildew)
Pathway
blac03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
94352523 (CCR75_008803)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blac03009
]
94352523 (CCR75_008803)
Ribosome biogenesis [BR:
blac03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
94352523 (CCR75_008803)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Utp12
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD_LRWD1
WDR54
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Mit_KHE1
Motif
Other DBs
NCBI-GeneID:
94352523
NCBI-ProteinID:
XP_067815907
UniProt:
A0A976FGK5
LinkDB
All DBs
Position
LG8:2647593..2650466
Genome browser
AA seq
957 aa
AA seq
DB search
MVKAYLRYERACSFGVIASVEGNVIYDSSGRLAISPALQDVAVWNIRQGNKVRELLAPET
GSGQVTALALSPDGDEVACGYSTGAVRVFKLASGALIVTLDGHKSAVEALTYRLDGAELA
SGSRDTDVILWDLVSQTGRFRLKGHKDSITALVFLTPTTLASSSKDTLVKVWDLDTQHCV
QTCVGHHNEVWSLALNPKGDRLVTGASDNQLRVWSVQPLNQDGDEIVTLLGSIYRQSNDR
AARVGYNRRGTLIGVQSTGKTVEIYRIRSDVEIKKKRQRREKRFREKRKKKQPLMNEKDQ
KKAEVELKGDAGDNMATDELELLCIVRSSHRVKSFAFSPDEAKDGSTSLLLGLQNNSIET
YSLSPSTLALEERYSKSHALTLSGHRSDVRQVAISSDDQLILSLSSTSVKVWNARSLQCI
RTLSEGLSLALSTAFAPGNMHVVVGTKLGQLLLFDLNSGECIWKDEKAHNGSAVWSIDVR
PDGRGIVTGGADQHVNFWEFEMVRLDHAEPNSTLRLGLSHVRMLKMSDDVLCVRFSHTKD
VKKLLVAVALLDCTVKVFYDDSLKFFVSLYGHKLPVMSMDISSDDAMLVTASADKNVKLW
GLDFGDCHKSIFAHQDSIMSVRFVRKTHYFFTASKDKSIAYWDGDHFERILKIDRHHFGE
VWGLAVSADGSFVVSCSQDRSLCKYIRTEDQVFIEEEKENEMEELFENDLVNTTHRKTPA
LGNNKTQEMETSASATKRTIESVHAGESIMEAIDLAETELEAIADFKRIQTKKEKEVAKK
KNDQKKDVQTNAQSATIEKEMASEDSSVLTRAPNMRLLGYAPLKYTLHTLRRIRPHDMEE
ALLVLPFDYVERLIRLLLQLISNHLEVEFCCRVLLFLLKLHNSAICARVELFNELELLWQ
RLRSQLVESKSRIGFNLAGLKYLKRTIDEERTGFVQEIAPIPASGNGQTKKKRKVEA
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaggcgtacctgcgttacgagcgtgcgtgctcctttggcgtaatcgcgtctgtc
gaaggaaacgttatttacgactctagtgggcgccttgccatttccccagcattgcaggat
gtagctgtatggaacattcgccaaggaaacaaagtccgcgagctgttggcacctgagacc
ggtagtggccaagtcactgcgctggcgctaagccctgatggagacgaagtggcctgcggg
tattcaactggagctgtacgcgtattcaagctggcatccggtgcacttatcgtgacatta
gatggccacaagagcgctgtcgaagcgctcacgtatcgcttggacggagccgagctcgcg
tcgggctcgcgcgataccgacgtgatcctctgggatttggttagtcaaacgggtcgattt
cgcctaaaaggccacaaggactcgattactgcgctcgtgtttcttacaccaacgactctc
gcgtcgagctccaaggacacgctcgtgaaagtgtgggacctcgatacacaacactgtgtg
caaacgtgtgtgggccaccacaacgaagtatggtcactagctctgaacccgaaaggggac
cgactcgtcacaggcgcgtccgataatcagttgcgagtgtggagcgtgcagcctcttaac
caagatggagacgagatagtcactcttctggggtcgatctatcgacaaagtaatgaccgt
gcggcacgagtagggtacaatcggaggggtacattaattggggtacagagtaccgggaag
accgtagagatttatcgtattcgatcggatgttgaaattaaaaaaaagcgtcaacgtcga
gaaaaacgatttcgtgaaaagcgcaagaaaaagcaacccttaatgaatgaaaaggatcaa
aagaaggctgaagtagaactcaaaggtgacgctggagacaatatggccacggatgaattg
gaactgctttgtatcgtgcgttcgtcgcaccgagtgaaatcgtttgcgttctctcccgat
gaagcgaaagatggttcgacgtccttactgcttggtttacagaacaatagcattgagacg
tacagtctttcgccaagtactcttgcgcttgaagagcggtattccaagtcgcatgcatta
acacttagtggccatcgatccgatgttcgtcaagttgcgattagttccgacgatcagctt
attctgtcgctgtcaagtacgtcggttaaggtttggaacgcgcgttcgttacagtgtatc
cggacactaagtgaaggtctatccttggcgttatcgacagcatttgcgcctggaaacatg
cacgttgtggtcggaacgaagcttggccagcttttactgtttgacttgaattcaggcgaa
tgtatctggaaagacgagaaagcacacaacggcagtgctgtctggagcattgatgtgcgt
ccagatggacgtggaattgttactggtggcgctgatcagcacgtgaacttttgggagttt
gaaatggttcgcttggaccatgccgagccgaatagtacactccgtcttggtctgtcccat
gtgcgtatgctcaagatgtcggacgacgtcttgtgtgttcgttttagccataccaaagat
gtcaagaaactcttggtggcagtcgcgctcttggattgtacggtgaaagtgttttacgat
gactcgctaaagttttttgtgagtctttatggccataaattacccgtcatgtcgatggat
atttcgtccgacgatgcgatgctcgtgacagcatctgcggacaagaatgtcaagttatgg
ggtcttgactttggcgattgccacaaatccatctttgctcaccaagacagtatcatgagc
gttcgttttgtgcgcaaaacgcactactttttcaccgcgtcgaaagacaagtcgattgcg
tactgggatggcgatcactttgaacggattttaaagattgatcgtcatcattttggagaa
gtctggggtctcgcagtgagtgcagatggaagctttgttgtgagttgttcacaagaccga
tcattgtgtaagtatattcgaaccgaagatcaagtgtttattgaagaagaaaaggaaaac
gaaatggaagagctgtttgaaaatgatcttgtgaatacaactcatcggaaaacaccggca
ttaggaaacaacaagactcaagagatggaaacgtcagcatcggctacgaaacgcacgatt
gaatccgttcatgctggagagagtatcatggaagctattgatcttgccgagaccgagttg
gaggcgattgcagactttaaacgtattcaaaccaaaaaagaaaaggaagtcgccaagaaa
aaaaacgatcaaaagaaggatgtacaaaccaatgcgcagtctgctacgattgagaaagaa
atggcgagcgaggattcgagcgtcctcacgcgtgcacctaatatgcggttattggggtac
gcgccgttaaaatacacgctgcatacccttcgacggattcgcccacacgacatggaggaa
gctcttcttgtgctgccatttgactacgtagagcggctcattcggttgctgctgcagttg
atttcgaatcacttagaagtcgaattttgttgccgcgtgttgctttttttgctaaaattg
cacaattcagccatttgtgcgcgtgtggaactctttaatgaacttgagctcttgtggcaa
cgactgcgttcgcaacttgtagagagcaagagccgcattggatttaacttggcaggactt
aagtacttgaaacgaacgattgacgaagagcgaactggatttgtacaagaaattgctccc
ataccggctagtggtaatggccaaaccaagaagaagcgcaaggtcgaagcctag
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