Bremia lactucae (lettuce downy mildew): 94353166
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Entry
94353166 CDS
T10371
Symbol
CCR75_009456
Name
(RefSeq) hypothetical protein
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
blac Bremia lactucae (lettuce downy mildew)
Brite
KEGG Orthology (KO) [BR:
blac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blac03009
]
94353166 (CCR75_009456)
03036 Chromosome and associated proteins [BR:
blac03036
]
94353166 (CCR75_009456)
Enzymes [BR:
blac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
94353166 (CCR75_009456)
Ribosome biogenesis [BR:
blac03009
]
Eukaryotic type
Pre-60S particles
Helicases
94353166 (CCR75_009456)
Chromosome and associated proteins [BR:
blac03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
94353166 (CCR75_009456)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
AAA_22
AP3D1
Motif
Other DBs
NCBI-GeneID:
94353166
NCBI-ProteinID:
XP_067822385
UniProt:
A0A976IJA8
LinkDB
All DBs
Position
LG1:complement(4817782..4819800)
Genome browser
AA seq
672 aa
AA seq
DB search
MAHGDEKSMLTKEEKAAKKLSKLARKLEKEKAKAAASESSDKKEKKHKKDKKEKKTGTSK
KRSREADLENDETDPAEETGESELEASRPKKVKNENATHVGGEENPPLDSFRICDVTKKN
LQTRGIYTLFPIQAMTFDKIMDGNDIIGRARTGMGKTLAFALPVIELLLQDKRPRPHGRA
PRVVCMAPTRELAKQVASEFELTGPSLSTVCIYGGASYQSQNHAFRSGVDILVGTTGRVI
DHIDRGSLRLHDCEFLILDEADTMLEMGFREDIQKVFAAMEKMQNECTRKRQTLLFSATI
PKWVKDVADNYMKKAEYVNLVKDSDSQASTDVQHIAIPCHWQGRPTLLASLLGVYASNES
RTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAAR
GLDMNVDLVINSEPPRKMSGVADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIEQ
KIGNKLIMRGPPDQEDLIKASAAKALKDINNVDPAMIEMFREKAIEILETMTPESCLAAA
LACITGHTKPPRRTSLMSGVPDYVTVQFVSSNCIRAKGYVWNALNRDFPENIANDVKQLT
LTEDLMGACFDLPIAGLELLEKQIVDSGFNCPYSIPKQLPNLQKAAYQMRQQSYRGGRGR
GGSFARGGRGRR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatggcgatgagaaaagtatgctaactaaggaggaaaaggccgctaagaagctt
tctaagttggccaggaagctggaaaaagaaaaagccaaggctgcggcttccgaatcgagt
gataaaaaggaaaaaaagcacaagaaggacaagaaagaaaaaaaaacaggaacgagcaaa
aagcgaagtcgcgaagccgatctggaaaatgatgaaactgatccagccgaagagacgggc
gaaagcgagctggaagcttcacgacccaagaaggttaagaacgagaatgccacccacgtc
ggtggtgaggagaatcctccgctcgatagcttccgcatttgcgatgtcactaagaagaac
ctccagactcgaggaatctacacactctttcccatccaagccatgacatttgacaagatc
atggatggcaacgacatcattggtcgcgctcgtactggtatgggtaaaaccttagccttc
gcactgcctgtaattgaattgcttcttcaagacaagcggccccggccgcatggtcgtgct
ccacgtgtggtttgtatggctcctactcgagagctagcaaagcaggtggcttctgagttt
gagctcaccggtccgtcattaagtactgtatgcatttatggaggtgcttcgtatcagtct
caaaaccatgcgtttcgcagtggtgtggatattttggtgggtacaactggtcgcgttatt
gatcacattgaccgaggcagtttgcgtcttcatgattgcgaatttctcattcttgatgaa
gccgacacgatgttagagatggggtttcgtgaggacatccaaaaggtttttgcggctatg
gaaaaaatgcagaacgagtgcacacgtaagcgccaaacgctacttttctccgcaacgata
ccaaaatgggtgaaggatgtggctgacaattatatgaagaaggccgagtacgtcaactta
gttaaagactcagacagtcaggcttctaccgacgtgcaacacattgccattccgtgccat
tggcaaggccggccgaccctgttggccagcttgcttggtgtttacgcgagtaacgagtca
cgcacgattatctttgccgaaacaaagaaggactgtaatgagttggctgtgcatcctgag
atcaagaccgactgccaggtgttgcacggggacattgcccaggagcaacgggaaactaca
atgaaagcttttcgtgaaggtcgtttgcgtttattaattgcaaccgatgtcgccgctcgt
ggcctggacatgaacgttgaccttgtaattaattcggagcctcctcgtaagatgtcaggt
gttgctgacgttgatacatacgttcatcgctctggacggaccggccgtgccggtaagaaa
ggcatatgtattactttgtatacaaaccgtcaacgcgatcaattgaaccagattgaacag
aagattggcaacaagctcataatgagaggtccgccggatcaggaggatctgatcaaggcg
tcagctgccaaagctttaaaagatatcaacaatgtcgaccctgccatgatcgaaatgttc
cgagaaaaagctattgaaatactcgagactatgacacctgaatcttgtctggctgctgca
cttgcctgtataacgggccacactaaaccgcctcgacgcacgtcacttatgtctggtgtg
ccggattacgtgacagtgcaatttgtgagctccaactgtattcgcgctaagggctatgtt
tggaatgcactgaatcgcgactttccggagaacattgcaaatgatgttaagcagttaaca
ctaacggaagatttgatgggtgcttgctttgatctcccaattgccggtctggaactcttg
gaaaaacagattgtggatagtggtttcaactgtccttactcgattccaaaacaacttcca
aatctgcagaaagcagcctatcaaatgcgccagcagagctacagaggaggacgtggtcgc
ggaggatcttttgctcgtggaggccgtggacgtcgttaa
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