Blattabacterium sp. DPU: G9C01_02875
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Entry
G9C01_02875 CDS
T10481
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blad Blattabacterium sp. DPU
Pathway
blad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9C01_02875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blad03021
]
G9C01_02875
03019 Messenger RNA biogenesis [BR:
blad03019
]
G9C01_02875
Transcription machinery [BR:
blad03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G9C01_02875
Messenger RNA biogenesis [BR:
blad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G9C01_02875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA
ATPase_2
AAA_25
Mor
Spore_III_AA
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QIK16856
LinkDB
All DBs
Position
584339..585913
Genome browser
AA seq
524 aa
AA seq
DB search
MFDITELKSKKLFELQEIARSSGLKKCTQLRKNELLEKIITIINNKNTSFNNKNTSAHSK
RENPLKKGFRMRKNTESKLSENKSINGKKNSQEHLKIINSKLSEESTKFQKKHQNFWKKN
DRLEVLNTSSSHGIEIGSQKKISSNKYRTPEYEFEGIIISEGVLEIMLENYGFLRSSDFN
YLSSPDDIYVSQSQIRLFGMKTGDTIRGEVRPPKDGEKYFPLIKILEINGRSPSFVRDRD
SFEHLTPLFPNEKFKLAERNATLSTRIVDLFTPIGKGQRGMIVAPPKTGKTTLLKEIANA
IAANHPEVYLIILLIDERPEEVTDMQRNVKGEVIASTFDEPADRHVKVANIVLQKAKRMV
ESSHDVVILLDSITRLARAYNTVAPASGKVLSGGVDANALHKPKRFFGAARNIENGGSLS
IIATAMIDTGSKMDEVIFEEFKGTGNKELQLDRKIANKRIYPAIDLVSSSTRKDDLLLDP
KTLQRMWILRKHLSDMNPVEAMEFLRSRMSRTQNNEEFLISMNG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatattactgaattaaaaagtaaaaaactttttgaattacaggagattgctcgt
tcttcaggattaaaaaaatgtacacaattacgaaaaaacgaactcctagaaaaaattatt
actattatcaataataagaatacttctttcaataataagaatacttctgcccattcaaaa
agggaaaatcctttaaaaaaaggatttagaatgcgaaaaaacactgaatctaaattatca
gaaaacaaaagcataaatggtaaaaaaaattctcaagaacatttaaaaattattaattcg
aaactttcggaagaatctacaaaatttcaaaaaaagcatcaaaatttttggaaaaaaaat
gatagattagaagttttaaacacatcgtcatctcacggaattgaaatcggatcacaaaaa
aaaatatcttccaataaatatcgtactcctgaatatgaatttgaaggaataataataagt
gaaggagtattagaaatcatgctagaaaattacggatttttgagatcttccgattttaat
tatttatcatctcctgatgatatttatgtttcacaatctcaaatcagactttttggaatg
aaaacaggagatacaatcagaggagaagttcgtcctcctaaagatggagaaaaatatttt
cctctaattaaaattcttgagatcaatggaagatctccttcttttgtaagggatagagat
tcttttgaacatttgactccattatttccaaatgaaaaatttaaattagctgaaagaaat
gcaactctttctacaagaattgtagatctttttactcccataggaaaaggacagagagga
atgattgtggctcctccaaaaacaggaaaaactactttattaaaagaaatagctaatgct
attgcggctaatcatcctgaagtatatctaattatattattaatagatgaacgtccagaa
gaagtaacagatatgcagagaaatgtcaaaggagaggtcattgcatctacttttgatgag
ccagcagatagacatgttaaagttgccaatattgttttacaaaaagcaaaaagaatggtg
gaaagttcacatgacgtagttatattgttagattctataacacgtttagcacgagcttat
aacacggttgctcctgcatctggtaaggtattatcaggaggagtagatgcaaatgcatta
cacaaacccaaaagattttttggagcggctagaaatatagaaaatggaggatccttatct
ataattgccacagctatgatcgatacaggatcaaaaatggatgaagtaatttttgaagaa
tttaaaggaacaggaaataaagaacttcaattagatagaaaaatagccaataaacgaatt
tatccagctattgatcttgtctcttctagtacaagaaaagatgatcttttacttgaccct
aaaacattacaaagaatgtggattttgcggaaacatctttccgatatgaatccagtagaa
gctatggaatttttaagatctaggatgtctagaacccaaaataatgaggaatttttaata
tctatgaatggatga
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