Blastochloris tepida: BLTE_00850
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Entry
BLTE_00850 CDS
T05837
Symbol
rhlE_1
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
blag
Blastochloris tepida
Pathway
blag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLTE_00850 (rhlE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blag03019
]
BLTE_00850 (rhlE_1)
Enzymes [BR:
blag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BLTE_00850 (rhlE_1)
Messenger RNA biogenesis [BR:
blag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLTE_00850 (rhlE_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBF91400
UniProt:
A0A348FVR7
LinkDB
All DBs
Position
114840..116372
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AA seq
510 aa
AA seq
DB search
MTDFNTLGLAAPILRALAEANHVNPTPIQSQAIPPVIAGRDLVGIAQTGTGKTAAFTLPI
LNRLAVHRSPARPERGAVRALVLAPTRELAGQILTAVKTYGKHLRLKTALAIGGVSMNPQ
VRALAQGVDVLVATPGRLMDLANHHAVRLDGVEVLVLDEADQMLDMGFIHAIRRIEALLP
HARQSLLFSATWPKEIEALAAKMMRDPVRVAVTPVAKTADRIDQRILLVDKADKTAILAD
VLRREPVERALIFARTKHGADKIVRMLDKAGLPAAAIHGNKSQNQRERVLAAFRDGSLRT
LVATDIAARGIDVAGVSHVVNFDLPNVPESYVHRIGRTARAGATGVAISLCDAEERPYLK
AIECLIRSSIPAVDLRGRARSGTGTAAPKVDLPKREGESAAAPRAARRTADPASRPAANP
ASRTASKPAAKPVAGRAAGPASRQDTKSSHERGHTGGKAAQRPAAARTGTGRPAAREAGP
DTGFAAMAFLKPARRPGRNTRFAPAARPVG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatttcaacacgctcggccttgccgcgccgatcctgcgcgccctcgccgaggcg
aatcacgtcaatccgaccccgatccagagccaggcgatcccgccggtgatcgcgggacgc
gacctcgtcggcatcgcccagaccggcaccggcaagaccgcagccttcacgctgccgatc
ctcaaccggcttgccgtccatcgcagccccgcccggcccgaacggggcgcggtgcgcgcg
ctggtgctggcgccgacccgcgagctggcgggccagatcctcacggccgtgaagacctat
ggcaagcacctgcggctgaagaccgcgctggcgatcggcggggtgtcgatgaacccgcag
gtccgcgcgctggcccagggcgtcgacgtgctggtcgccactcccggccggctgatggat
ctggccaaccaccacgccgtgcggctcgacggcgtcgaggtgctggtgctggacgaagcc
gaccagatgctcgacatgggcttcatccacgctatccgccggatcgaggcgctgctgccg
cacgcgcgccagagcctgctgttctcggccacctggcccaaggagatcgaggcgctggcc
gccaagatgatgcgcgatccggtgcgggtggcggtcaccccggtggccaagaccgccgac
cgcatcgaccagcgcatcctgctcgtcgacaaggccgacaagacggcgatcctggccgat
gtgctgcggcgcgagccggtggagcgggccctcatcttcgcccgcaccaagcacggcgcc
gataaaatcgtgcgcatgctcgacaaagccggcttgccggcggcagcaatccacggcaac
aagtcgcagaaccagcgcgagcgggtgctggccgcctttcgcgacggcagcctgcgcacg
ctggtggcaaccgatatcgccgcccgcggcatcgacgtcgcgggcgtcagccatgtggtg
aatttcgacttgcccaacgtgcccgagagctatgtgcatcgcatcggccgcaccgcccgt
gccggcgccacgggcgtggcgatctccctgtgcgatgccgaggagcggccctatctcaag
gccatcgagtgcctgatccgcagctccatcccggcggtcgatctgcgcgggcgggcacgg
tcggggacgggcacggctgcgcccaaggtcgatttgcccaagcgtgagggcgagtccgcg
gcggctccgcgcgccgccaggcggacggccgatccggcgtcacggcctgcggccaatccg
gcgtcaaggacggcatccaagcctgcggcaaagccggtggcgggtcgggctgccggtccg
gcctccaggcaggacaccaagtcgagtcacgagcgcgggcacacgggcggcaaggccgcc
cagcggccggccgccgcccggaccgggacgggacggccggcggcgcgcgaagcgggcccg
gacaccggcttcgcggccatggcgttcctcaagccggcgcgacggccgggccggaacacc
cggtttgcgcctgcggcgcgtccggtgggctga
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