Blastochloris tepida: BLTE_09270
Help
Entry
BLTE_09270 CDS
T05837
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
blag
Blastochloris tepida
Pathway
blag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLTE_09270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blag03019
]
BLTE_09270
Messenger RNA biogenesis [BR:
blag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLTE_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBF92242
UniProt:
A0A348FY59
LinkDB
All DBs
Position
1018772..1020442
Genome browser
AA seq
556 aa
AA seq
DB search
MIKAEAELVFVPLGGVGEIGMNFGLYGVGQGRKRQWLAVDCGVGFANEQLPGIDLMLPDI
RFIEEERKNLLGIVISHGHEDHIGALADLWPRLRAPVYTTPFTAQLITVRRLQEAGAPDI
PIEVVPVGGRVSLGPFEVDFVPVAHSIPESHALAIKTPLGTVLHTGDWKIDPTPVVGSIT
DEARFRALGDAGVLAMVADSTNSVREGRSASEADAGANLAKVIAAARGRVAVTTFASNVA
RMVSVAKAAEAAGREVVLVGRAMERVSMVARELGYLDGVRPFRSVDTYGYLPRDKVVALI
TGSQGEPRAALARIALDEHPDIALSPGDTVVFSARAIPGNEIGIGRIINALIRQGVEVIT
DRTHMIHVSGHPRRGEMADLLRWVRPQILLPVHGEALHMHEHALLAEEVGVPEVVRCGNG
DVVRLAPGPAEVVDEVPAARLYKDGKVLIEDASRTVADRRKLSFVGIVAVALALTDKGEL
AGDVRIESLGLPERAADGRTFDSIVDDAVLETLETLPRPRRRDPRAVEESITRGVRGTVA
EAWGKKPIVRVMVVQV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggccgaagccgaactggtgttcgtgccgctcggcggcgtcggcgagatcggc
atgaatttcgggctctatggcgtcggccaggggcgcaagcgccagtggctggcggtggac
tgcggcgtcggcttcgccaacgagcagttgcccggcatcgatctcatgctgcccgacatc
cgcttcatcgaggaagagcgcaagaacctcctcggcatcgtcatcagccacggccacgag
gaccatatcggcgcgctggccgatctgtggccgcgcctcagggcgccagtctacaccacg
ccgttcacggcgcagctcatcaccgtgcgccgcctgcaggaggcgggggcgccggacatt
ccgatcgaggtcgtgccggtcggcggccgcgtctcgctcgggccgttcgaggtggatttc
gtgcccgtggcgcactcgatccccgaaagtcacgcgctggcgatcaagacgccgctcggc
actgtgctgcacaccggcgactggaagatcgatcccacgccggtggtcggctccatcacc
gacgaggcgcgtttccgggcgctgggcgatgccggcgtgctggcgatggtggccgattcg
accaattcggtgcgggaagggcgctcggcctccgaggccgatgccggcgccaacctcgcc
aaggtgatcgccgcggcgcgggggcgggtggcggtcaccaccttcgcctccaacgtggcg
cgcatggtgtcggtggcgaaggccgccgaggcggcgggacgcgaggtggtgctggtcggc
cgcgccatggagcgcgtctccatggtggcgcgcgaactgggctatctcgacggggtgcgc
ccgttccgctcggtcgatacctacggctacctgccgcgcgacaaggtggtggcgctgatc
accggaagccagggcgagccgcgcgcggcgctggcccgcatcgcgctcgacgagcatccg
gacatcgcgctgtcgcccggtgacacggtggtgttctcggcccgggccatccccggcaac
gagatcggcatcggccgcatcatcaatgcgctgatccgccagggcgtcgaggtcatcacc
gaccgcacccacatgatccatgtctccggccatccgcgccgcggcgagatggccgatctg
ctgcgctgggtgcgcccgcaaatcctgctgccggtgcatggcgaggcgctgcacatgcac
gagcatgcgctgctggccgaggaggtcggcgtgcccgaggtggtgcggtgcggcaatggc
gacgtggtgcggctggcgccggggccggccgaggtggtcgacgaggtgccggcagcgcgc
ctctacaaggacggcaaggtgctgatcgaggatgcctcgcgcaccgtcgccgaccgccgc
aagctgtccttcgtcggcatcgtcgcggtggcgctggcgctgaccgacaagggcgaactc
gccggcgacgtgcgcatcgagtcgctcggcctgcccgagcgtgccgccgatggccgcacc
ttcgattcgatcgtcgacgacgctgtgctcgaaaccctcgaaaccttgccgcgcccgcgc
cggcgcgacccgcgcgccgtcgaggaatcgatcacccgcggcgtgcgcggtacggtcgca
gaggcctggggcaagaagccgattgtccgggtgatggtcgtccaggtatga
DBGET
integrated database retrieval system
