Blastochloris tepida: BLTE_17920
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Entry
BLTE_17920 CDS
T05837
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
blag
Blastochloris tepida
Pathway
blag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLTE_17920 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blag03021
]
BLTE_17920 (rpoB)
03400 DNA repair and recombination proteins [BR:
blag03400
]
BLTE_17920 (rpoB)
Enzymes [BR:
blag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLTE_17920 (rpoB)
Transcription machinery [BR:
blag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLTE_17920 (rpoB)
DNA repair and recombination proteins [BR:
blag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLTE_17920 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
BBF93107
UniProt:
A0A348G0M4
LinkDB
All DBs
Position
complement(1926996..1931117)
Genome browser
AA seq
1373 aa
AA seq
DB search
MAQTFSGRKRIRRFFGGIREVAEMPNLIEVQKASYDQFLLVEEPKGGRPNEGLQAVFKSV
FPISDFSQTAMLEFVRYDFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDVDAETGAKSV
KDIKEQDVYTGDIPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAA
RIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLFALGLDPETILNTFYRQVHYKKDR
DGWRMPFDPARFKGFKATADLIDADTGEVVVEAGKKLNARQARLLVEKGLKALRATDADL
IGQYLAEDMVNPQTGEIFAEAGEEVSEKTLKTLVDAGYDELPMLDIDHVNTGAYIRNTLA
IDKNSAREEALFDIYRVMRPGEPPTLETAEAMFHSLFFDPERYDLSAVGRVKMNMRLDLD
ADDSMRVLRREDILAVVKTLVELRDGKGEIDDIDHLGNRRVRSVGELMENQYRLGLLRME
RAIKERMSSVDIDTVMPQDLINAKPVAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHTTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPYR
RVKDGHVTEEVIYLSAMEEGKYYVAQANIPLDANGRFLEDLVVCRHGGDVLMVSPDKVDF
MDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPLVGTGMEAVVARDS
GAAIPARRTGIVDQVDATRIVIRATEETDPTKPGVDIYRLQKFQRSNQNTCINQRPLVRV
GDQVKKGDVIADGPSTEYGELALGRNCLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHL
EEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGADVHAGDILVGKITPKGES
PMTPEEKLLRAIFGEKAADVRDTSLRVPPGVQGTVVEVRVFNRHGVDKDERALAIEREEI
ERLAKDRDDELAILDRNVYTRLADILDGKTAVAGPKGFKKDTVLSREVFTEFPRAQWWQF
AFADDQLMSELEAMRKQYDDSKKRLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKI
QPGDKMAGRHGNKGVVSRIVPAEDMPFLADGTPVDMVLNPLGVPSRMNVGQILETHLGWA
CAGLGRKIGQAVDAYMAQNNVEALKATVKEVYAPHDPSIASLDDQGFVELGHGLRRGVPI
ATPVFDGAHEADIEHMLELAGLDRSGQSDLFDGRTGEQFDRKVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELQSSKPVAAEQLPPAAE
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggctcagacgttcagcggtcgcaagcgtattcgcaggttcttcggcggtatccgtgaa
gtcgcggagatgcccaacctcatcgaggtgcagaaggcctcgtacgaccagttcctgctg
gttgaggaaccgaagggcggccgacccaacgaggggcttcaggcggtcttcaagtcggtg
ttcccgatctccgacttctcgcagaccgcgatgctggagttcgtgcgctacgatttcgag
ccgccgaagtacgacgtcgacgagtgccgccagcgcggcatgacgttcgccgcacccctc
aaggtgacgctgcgcctgatcgtgttcgatgtggacgccgaaaccggcgccaagtcggtc
aaggacatcaaggagcaggacgtctacaccggcgacattccgctgatgacgtcgaacggc
accttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgctcgccgggc
gtgttcttcgaccacgacaagggcaagagccactcctcgggcaagctgctgtttgccgcc
cgcatcattccctatcgcggctcctggctcgacatcgagttcgacgccaaggacatcgtc
tatgcgcgcatcgaccggcgccgcaagattccggtgacgagcctgctgttcgcgctcggc
ctcgatccggagaccatcctcaacaccttctaccgccaggtccattacaagaaggaccgg
gacggctggcgcatgccgttcgatccggcccgcttcaagggcttcaaggcgacggccgat
ctcatcgacgccgacaccggcgaggtggtggtcgaggccggcaagaagctcaacgcccgg
caggcccgcctgctggtcgagaagggcctgaaggcgctgcgcgccaccgacgccgacctg
atcggccagtacctcgccgaggacatggtcaatccgcagaccggcgagatcttcgccgag
gccggcgaggaggtgtccgagaagaccctcaagacgctggtcgatgcgggctatgacgag
ctgccgatgctcgacatcgaccacgtcaacaccggcgcctacatccgcaacacgctggcg
atcgacaagaactcggcccgcgaggaggcgctgttcgacatctaccgggtgatgcgcccg
ggcgagccgccgacgctggaaaccgccgaggcgatgttccactcgctgttcttcgatccc
gagcgctacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgacctcgac
gccgacgactcgatgcgcgtgctgcgccgcgaggacatcctggcggtggtcaagacgctg
gtcgagctgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgccgc
gtccgctcggtcggcgagctgatggagaaccagtaccggctgggcctgctgcgcatggag
cgcgccatcaaggagcgcatgtcgagcgtcgacatcgacaccgtgatgccgcaggacctg
atcaacgccaagccggtggcggcggcggtgcgcgagttcttcggctcgtcgcagctgtcg
cagttcatggaccagaccaatccgctgtcggagatcacccacaagcgccgtctgtcggcg
ctgggtccgggcggtctgacgcgcgagcgcgccggcttcgaggtgcgcgacgtccacacc
acgcactatggccgcatctgcccgatcgagacgccggaaggcccgaacatcggcctgatc
aactcgctcgccaccttcgcgcgcgtcaacaagtacggcttcatcgagacgccctaccgc
cgcgtgaaggacggccacgtgacggaggaggtgatctacctctccgccatggaggagggg
aagtattacgtcgcgcaggccaacatcccgctcgacgcgaacggccgcttcctcgaagac
ctcgtggtctgccgccacggcggcgacgtgctgatggtgtcgcccgacaaggtcgacttc
atggacgtgtcgccgaagcagctggtgtcggtcgccgccgcgctcatcccgttccttgag
aacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgtcaggccgtgccgctg
gtgcgcgccgaggcgccgctggtcggcaccggcatggaggcggtggtcgcccgcgactcg
ggcgccgccattccggcgcgccgcaccggcatcgtcgatcaggtggacgccacccgtatc
gtcatccgggcgacggaagagaccgacccgaccaagcccggcgtcgacatctaccgcctg
cagaagttccagcgctccaaccagaacacctgcatcaaccagcgtccgctggtgcgggtg
ggcgatcaggtgaagaagggcgacgtcatcgccgacggtccctcgaccgagtacggcgag
ctggcgctcggccgcaactgcctcgtcgccttcatgccgtggaacggctacaacttcgag
gactcgatcctgctctccgagcggatcgtgaaggatgacgtgttcacctcgatccacctc
gaagagttcgaggtgatggcccgcgacaccaagctcgggccggaggagatcacgcgcgac
attccgaacgtgtcggaagaggcgctgaagaacctcgacgaagccggcatcgtctatatc
ggcgccgacgtgcatgccggcgacatcctggtcggcaagatcacgccgaagggcgaaagc
ccgatgacgccggaagagaagctgctgcgcgccatcttcggcgagaaggcggccgacgtg
cgcgacacgagcctgcgggtgccgccgggcgtccagggcacggtggtcgaggtgcgcgtg
ttcaaccgccacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgcgaggagatc
gagcgcctcgccaaggaccgcgacgacgaattggcgattctcgaccgcaacgtctacacc
cgccttgccgacattctcgacggcaagaccgcggtggccggccccaagggcttcaagaag
gacaccgtgctgtcgcgcgaggtcttcaccgagttcccgcgggcgcagtggtggcagttc
gccttcgccgacgaccagctcatgagcgagttggaggcgatgcgcaagcagtacgacgac
tccaagaagcgcctcgagcagcgcttcctcgacaaggtcgagaagctgcagcgcggcgac
gagctgccgcccggcgtgatgaagatggtcaaggtcttcgtcgccgtgaagcgcaagatc
cagccgggcgacaagatggccggccgccacggcaacaagggcgtggtgtcgcgcatcgtg
ccggcggaggacatgccgttcctcgccgacggcacgccggtcgacatggtgctcaatccg
ctcggcgtgccgagccgcatgaatgtcggccagatcctggagacgcatctcggctgggcc
tgcgccggcctcggccgcaagatcggccaggcggtcgacgcctacatggcgcagaacaac
gtcgaggcgctgaaggcgacggtgaaggaggtctacgcgccgcacgatccctcgatcgcg
tcgctggacgatcagggcttcgtcgagctcggccacggcctgcgccgcggcgtgccgatc
gccaccccggtgttcgacggcgcgcacgaggcggacatcgagcacatgctggagcttgcc
ggcctcgaccggtccggccagagcgacctgttcgacggccgcaccggcgagcagttcgac
cgcaaggtcacggtcggctacatctacatgctgaagctgcaccatctggtcgacgacaag
atccacgcccgttcgatcggcccgtactcgctggtcacccagcagccgctgggcggcaag
gcgcagttcggcggccagcgcttcggcgaaatggaggtgtgggcgctcgaagcctatggc
gccgcctacaccctgcaggaaatgctgacggtgaagtcggacgacgtggccggccgcacc
aaggtctacgaggcgatcgtccgcggcgacgacacgttcgaggccggcattcccgaaagc
ttcaacgtgctggtcaaggaaatgcgttcgctcggcctgaacgtcgagctgcagtccagc
aagcccgtggcggcggagcagctgccgccggcggctgaataa
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