Blastochloris tepida: BLTE_28270
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Entry
BLTE_28270 CDS
T05837
Symbol
rpoN2
Name
(GenBank) RNA polymerase sigma-54 factor 2
KO
K03092
RNA polymerase sigma-54 factor
Organism
blag
Blastochloris tepida
Pathway
blag02020
Two-component system
blag02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BLTE_28270 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BLTE_28270 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blag03021
]
BLTE_28270 (rpoN2)
Transcription machinery [BR:
blag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BLTE_28270 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
BBF94142
UniProt:
A0A348G3K9
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All DBs
Position
3098225..3099760
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AA seq
511 aa
AA seq
DB search
MALSQKLELRQSQSLVMTPQLMQAIKLLQLSHLDLSAYVDAELERNPLLERAEEPEFSTP
AEAAGAEPEPPPAPEDQRAGDWLESPLGSREAIEARLDTDLGNVFQDDGPAEPHHTTSEP
VGYSEWASVGAGGRLEEDSDLDAYVSAATSLADHLSEQLALAEPDPRRRLIGQYLIDLVD
EAGYLTADLAEVAAKLGAPEETVADVLAVIQTFEPSGVAARSLAECLALQLKDRDRFDPA
MAALVDNLPLLAKRDFAALRKLCEVDDEDLVDMVAELKRLDPKPGLAFGGGPVTPIVPDV
FVRPAPDGGWQVDLNTDTLPRLLINQSYFGRVAPAAKDAKDKTFLADCLQTATWLTRALD
QRAKTILKVAMEITRQQDAFLAHGVEHLRPLVLKTVADAISMHESTVSRVTSNKYMATPR
GIFEMKYFFTSAIAAAGGGDAHSAEAVRHRIKQMIDAESAADVLSDDTIVKRLREAGIDI
ARRTVAKYREGMRIPSSVQRRREKQSAAAVS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttcgcaaaagctcgaacttcgccagagccagtcgctggtgatgacgccgcag
ctcatgcaggcgatcaagcttctgcaactctcccatctcgacctctccgcctatgtcgac
gccgagctggaacgcaacccgctgctggagcgggcggaggagccggaattctcgaccccc
gccgaggccgcaggcgccgagcccgagccgccgcccgcccccgaggaccagcgcgccggc
gactggctcgaatccccgcttggctcgcgcgaggcgatcgaggcgcggctcgataccgac
ctcggcaacgtgttccaggatgacgggccggccgaacctcaccacaccacctccgagccg
gtgggctattcggaatgggcctcggtcggcgccggcggccgcctcgaggaggattcggac
ctcgacgcctatgtctcggccgcgacctcgctcgccgaccacctgtccgagcagctcgcg
ctggccgagccggacccgcggcggcggctgatcggccagtatctcatcgacctcgtcgac
gaggccggctacctcaccgccgatctcgccgaggtggcggccaagctcggcgcgcccgag
gagacggtggcggacgtgctggcggtgatccagaccttcgagccctcgggcgtcgccgcc
cgctcgctggccgaatgcctcgctttgcagctcaaggaccgcgaccgcttcgacccggcg
atggccgcgctggtcgacaatctgccgctcctcgccaagcgcgacttcgccgcgctccgg
aaactgtgcgaagtcgacgacgaggacctcgtcgacatggtggccgagctgaagcggctc
gaccccaagccggggctcgccttcggcggcggcccggtgacgccgatcgtgccggacgtg
ttcgtgcgtccggcgcccgacggcggctggcaggtcgatctcaacaccgacaccctgccg
cgcctcctgatcaaccagagctatttcggccgcgtcgctccggcggccaaggacgccaag
gacaagaccttcctcgccgactgcctgcagaccgcgacctggctcacccgcgccctcgac
cagcgggccaagaccatcctcaaggtggcgatggagatcacccgccagcaggacgccttc
ctcgcccacggcgtggagcatttgcgcccgctggtgctcaagaccgtggccgacgccatc
tcgatgcatgaatcgacggtgtcgcgcgtcacctccaacaaatacatggcgacgccgcgc
ggcatcttcgagatgaaatacttcttcacctcggcgatcgcggcggccggcggcggcgat
gcgcattcggcggaggccgtgcgccaccgaatcaagcagatgatcgacgccgagagcgcc
gccgacgtgctgtccgacgacaccatcgtcaagcggctgcgcgaggccggcatcgacatc
gcccggcgcaccgtcgccaagtatcgggaaggcatgcgcattccctcctccgtccagcgc
cggcgcgagaagcagagcgcggccgccgtatcgtga
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