Blastochloris tepida: BLTE_35150
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Entry
BLTE_35150 CDS
T05837
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
blag
Blastochloris tepida
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blag03019
]
BLTE_35150
Enzymes [BR:
blag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BLTE_35150
Messenger RNA biogenesis [BR:
blag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BLTE_35150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
CON_HrpB
AAA_30
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BBF94830
UniProt:
A0A348G5J7
LinkDB
All DBs
Position
3849676..3852141
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AA seq
821 aa
AA seq
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MAGDPLPVDEALPGLTAALRERANAVLVAPPGAGKTTRVPLVLLDQDWAAGRKILLLEPR
RLAARAAAARMAATLGERVGDTVGLRVRFASQVSARTRLEVVTEGVFTRLILDDPTLEGV
AAVIFDEYHERSLDADLGLALALDAQGALRPDLKLLVMSATLDGARVARLLGEADVIESQ
GRAFPVDTRHVGRNPALRLEDEVAACVRRALAEEDGSLLVFLPGAAEIRRVAERLTESVR
DPAVDIAPLYGALDAAAQDRAVEPSPPGRRKVVLATSIAETSLTIAGVRGVIDCGLARVP
RYEPDVGLTRLETVRVSRAAADQRRGRAGRTEPGVCWRLWDEPQTMSLPAFATPEILAAD
LASLVLDLAAWGVTDPATLAWLDPPPAGAWAEARALLVELDALDAGGRLTEEGRALRRLP
LHPRLARMVVDGARAGAAGLAAEVAAILSERGLGGDDVDLDSRLQSFRRDRSRRAEDARR
AAAGWARLAGGAPKGQTSALSPALLLALAYPDRLAKARGRPGAFLLANGRGAGLDPATAL
AKSPFLAVGELAGAAAEPRILIAGALDLADIETHFAAHIEARTELSFDTGAAALRARKVR
RLGALALAEAPLPVPGDDAAARALAEGVAKLGLARLPWTKALVQWRDRVAFLRKAEGEVW
PDLSDAALAAAAAGWLAPHLVGRSALADIDAATLEAALHALVPWDMARRLDAEAPTHFTA
PTGSRLAVDYAAEAGPTVSVRVQELFGLSTHPALAGGRVPLVLELLSPAHRPIQVTRDLP
GFWKGSWSAVRAEMRGRYPKHPWPEDPAAAVPTTRAKPRGT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggatccactcccggtcgacgaggcgttgccggggctgaccgcggcgctccga
gagcgcgcgaacgccgtgctggtggcgccgcccggcgccggcaagaccacgcgcgtgcca
ctggtgctgctcgaccaggactgggccgcgggcaggaagatcctgctgctggagccgcgg
cgtctcgccgcccgggccgccgctgcccgcatggcggcgacgctcggcgagcgggtcggc
gacacggtgggcctgcgcgtgcgcttcgcctcgcaggtctcggcccgcacccggctggag
gtggtcaccgagggcgtgttcacccggctgatcctcgacgacccgacgctggagggtgtc
gcggcggtgatcttcgacgaatatcacgagcgctcgctcgatgccgatctcggcctcgcg
ctggcgctcgatgcgcaaggggcgctgcggccggatctgaagctcctggtgatgtcggcg
acgctggacggcgcccgcgtcgcccgcctcttgggcgaggcggacgtgatcgagagccag
ggccgcgccttcccggtcgacacccgccatgtcgggcgcaacccggcgctgcggctggag
gacgaggtggcggcgtgcgtgcgccgcgcactggcggaggaggacggctcgctcctggtg
ttcctgcccggtgccgccgagatccggcgcgtcgccgagcgcctcacggagagcgtgcgc
gacccggcggtcgacatcgccccgctctatggcgccctcgatgccgctgcgcaggaccgc
gcggtcgagccctcgccgcccgggcggcgcaaggtggtgctggcgacctcgatcgccgag
accagcctgaccatcgcgggcgtgcggggcgtgatcgattgcgggctcgcccgcgtgccc
cgctatgagccggacgtcgggctgacgcggcttgagaccgtgcgggtgtcgcgggccgcc
gccgaccagcggcgcggccgcgccgggcgcaccgagcccggcgtgtgctggcggctgtgg
gacgagccgcagaccatgagcctgccggccttcgccacgcccgagatcctcgccgccgac
ctcgcctcgctggtgctcgatctcgccgcctggggcgtcaccgacccggcgacgctggcc
tggctcgatccgccgccggccggcgcttgggccgaggcccgcgcgctgctggtcgagctc
gatgcgctcgacgcgggaggccggctgaccgaggaggggcgggcgctgcgacgcctgccg
ctgcatccgcggcttgcccgcatggtggtggacggcgcccgggccggtgcggcggggctt
gccgcagaggtcgccgccatcctgtccgaacgcggcctcggcggcgatgatgtggatctc
gatagccggctgcagtccttccggcgcgaccgctcgcgccgcgccgaggatgcgcgacgg
gccgcggccggctgggcgcggctcgccggcggcgcgccgaaggggcagacctccgccctg
tcgccggcgctgctgctggcactggcctatcccgatcgcctcgccaaggcgcgcggccgg
cccggcgccttcctgctcgccaatggccgcggcgccgggctcgatccggcgaccgctttg
gcgaagagcccgttcctggcggtcggcgaactggccggtgcagccgccgagccgcgcatc
ctcattgccggtgcgctcgatcttgccgacatcgagacgcatttcgcggcgcacatcgag
gcccgcaccgagctttcgttcgataccggggcggcggcgctgcgtgcgcgcaaggtccgc
cggctcggcgcgctggcgctcgccgaggcgccgctgccggtgccgggcgatgacgccgct
gcccgcgcgctggccgagggcgtggcaaagctcgggctcgctcgcctgccctggacgaaa
gcgcttgtgcaatggcgcgaccgcgtcgccttcctgcgcaaggcggaaggcgaggtgtgg
cccgacctttcggatgccgcgctcgctgcggccgcggctggctggctggcgccgcacctc
gtcggcaggagcgcgctggccgacatcgacgcggcgacgctggaggcggcactgcacgcg
ctggtgccgtgggacatggcgcggcggctcgacgccgaggcgccgacccatttcaccgcg
ccgaccggctcgcgcctcgccgtcgattacgccgctgaggccggtcccaccgtgtcggtg
cgggtgcaggaactgttcggcctttctactcatccggcgctggccggcggccgggtgcct
ctggtgctggagctgctgtcgcccgcccaccggccgatccaggtgacgcgcgacctgccg
gggttctggaagggctcgtggagcgcggtgcgggccgaaatgcgcggccgctatcctaag
cacccctggccggaagacccggcggcggccgtgcccaccactcgcgccaagccccgcggc
acctga
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