Blastococcus sp. PRF04-17: MVA48_03785
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Entry
MVA48_03785 CDS
T08406
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
blap
Blastococcus sp. PRF04-17
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blap03019
]
MVA48_03785
Enzymes [BR:
blap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MVA48_03785
Messenger RNA biogenesis [BR:
blap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MVA48_03785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
DEXQc_Suv3
AAA_22
nSTAND3
SAMP2
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UOY02514
LinkDB
All DBs
Position
747995..749845
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AA seq
616 aa
AA seq
DB search
MSSPAERYAAARRRTAHPTLADFTAELGFSLDPFQVEACEALEQGSGVLVCAPTGAGKTV
VGEFAIHKALAEGRKAFYTTPIKALSNQKYADLVERYGSDKVGLLTGDNAVNGDAPVVVM
TTEVLRNMLYAESPAIDGLGYVVMDEVHYLADRFRGAVWEEVIIHLPQSVTLVSLSATVS
NAEEFGEWLVTVRGHTTVVVSEVRPVPLWQHMLVGNRVFDLFSLRPAAHAAEQGTGPREL
STRERGTSVVDPELVRFVREHERRIDSWHGGGPGSRRRDDSHRPRYRPPARSDVVTRLDN
AGLLPAITFVFSRNGCDAAVHQCLLSGLRLTDEFERSEIAEIIDRRTGSLLEEDLHVLGF
WEWREGLLAGLAAHHAGLVRRSRRPSRSASSAAWSRRCSRRRPSPWASTCRPAASSWSGW
SSGTARRTSTSRRGSTPSSPAAPGAGASTSRGTRWSSGRRESTPPPSRAWRAPGPFRCAR
RSGPATTWRSTWSARSAGPAPASCWRAPSRSSRPTGRSSGWPAPRPGTSRRRRGRRRRCT
PTAATSARTRCCGARSPTARRSSPATRRPSAAWRPPTPSPRCAPATSSGCRRAAGRGWPS
SSTPASPTSPTPARWW
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccccgctgagcggtacgcggctgcccggcggcggaccgcccaccccaccctg
gcggacttcaccgccgaactcgggttctccctcgacccgttccaggtcgaggcatgcgag
gcgctggagcaggggtcgggcgtcctcgtctgcgcgccgaccggtgcgggcaagaccgtc
gtcggcgagttcgcgatccacaaggccctggccgaggggcgcaaggccttctacaccacc
ccgatcaaggcgctgtccaaccagaagtacgccgacctcgtcgagcggtacgggtccgac
aaggtcggcctcctgaccggcgacaacgcggtgaacggcgacgcccccgtggtcgtgatg
accaccgaggtcctccggaacatgctctacgccgagtcgccggcgatcgacggcctgggc
tacgtcgtcatggacgaggtgcactacctcgccgaccggttccgcggcgcggtgtgggaa
gaggtgatcatccacctcccgcagtcggtcaccctggtctcgctgtcggcgacggtgagc
aacgccgaggagttcggcgaatggctggtcaccgtccgcggccacacgaccgtggtcgtc
agcgaggtccggccggtgccgctctggcagcacatgctcgtcggcaaccgggtgttcgac
ctgttctcgctgcggcccgccgcgcacgccgccgagcaggggaccggcccccgcgagctg
tccacgcgcgagcgcggcacctccgtcgtcgaccccgagctggtgcgcttcgtccgcgag
cacgagcgccggatcgactcctggcacggcggcggccccggctcgcggcgccgcgacgac
tcgcaccggccgcgctaccgcccgccggcccgctccgacgtcgtcacccggctcgacaac
gccggtctgctgccggcgatcaccttcgtgttcagccgcaacggctgcgacgccgccgtc
caccagtgcctgctgtccggcctgcggctgaccgacgagttcgagcggtccgagatcgcc
gagatcatcgaccggcgcaccggctcgctgctggaggaggacctgcacgtcctgggcttc
tgggagtggcgcgagggcctgctcgccgggctcgcggcgcaccatgcgggcctggtgcgg
cgttcaaggagaccgtcgaggagtgcttcgtccgcggcctggtcaaggcggtgttcgcga
cggagaccctcgccctgggcatcaacatgccggcccgcagcgtcgtcctggagcggctgg
tcaagtggaacggcgaggcgcacgtcgacatcacgccgggggagtacacccagctcaccg
gccgcgccgggcgccggggcatcgacgtcgaggggcacgcggtggtcgtctggtcgccgg
gagtcgaccccgccgccgtcgcgggcctggcgagcacccggacctttccgctgcgctcgt
cgttccggcccagctacaacatggcggtcaacctggtcagctcgttcggccgggcccgcg
cccgcgagctgctggcgagctccttcgcgcagttccaggccgaccggtcggtcgtcgggc
tggcccgcgccgcggccaggcacgagcaggaggcggcgcgggcggcgaaggagatgcact
ccgaccgcggcgacgtcggcgcgtacgcgctgctgcggcgcgagatcgccgaccgcgaga
aggagctctcccgcgactcgcaggccaagcgccgcatggaggccgccgacgccctcgccg
cgctgcgccccggcgacgtcatccgggtgccgacgggccgccggcaggggctggccgtcg
tcctcgaccccggcatcaccgacctcgccgacccccgcccgctggtggtga
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