Blastococcus sp. PRF04-17: MVA48_05580
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Entry
MVA48_05580 CDS
T08406
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MVA48_05580 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
blap03011
]
MVA48_05580 (rpsA)
Ribosome [BR:
blap03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MVA48_05580 (rpsA)
Bacteria
MVA48_05580 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
Caudal_act
MbeD_MobD
Motif
Other DBs
NCBI-ProteinID:
UOY02827
LinkDB
All DBs
Position
complement(1097986..1099452)
Genome browser
AA seq
488 aa
AA seq
DB search
MTSTQVRPSSTPQIAINDIGSAEDFLAAIDQTIKYFNDGDIVEGVIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPNEVVSVGDEVEALVLQKEDKEGRLILSKKRAQYERAWGTIE
AKKEADEVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRELEAKIIELD
KNRNNVVLSRRQWLEQTQSEVRSEFLNKLAKGQVRSGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHQIGQVV
PGKVTKLVPFGAFVRVDEGIEGLVHISELAERHVEIPEQVVQVGDEILVKVIDIDLDRRR
ISLSLKQANEGVVGDEEQFDPAAYGMAASYDEQGNYLYPEGFDPDTGEWREGYESQREEW
ERQYAEAQARFEAHRKQIAAAKEADAEAAAGGNYTSDDSAGSDPAATGGTLASDEALAAL
RAKLAGGE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactcaggtccgtccttccagcaccccccagatcgcgatcaacgacatcggc
tcggccgaggacttcctcgcggcgatcgaccagacgatcaagtacttcaacgacggcgac
atcgtcgaaggcgtcatcgtcaaggtcgaccgggacgaggtgctgctggacatcggctac
aagaccgagggcgtcatcccctcgcgcgagctctccatcaagcacgacgtcgatcccaac
gaggtcgtcagcgtcggcgacgaggtggaagccctggtcctccagaaggaggacaaggaa
ggccggctgatcctctccaagaagcgcgcccagtacgagcgcgcctggggcacgatcgaa
gccaagaaggaagccgacgaggtcgtcaccggcaccgtcatcgaggtcgtcaagggtggt
ctcatcctcgacatcggcctgcgcgggttcctgcccgcctcgctggtcgagatgcgccgc
gtccgcgacctgcagccctacgtgggccgcgagctcgaggccaagatcatcgagctcgac
aagaaccgcaacaacgtcgtcctctcccggcgccagtggctggagcagacccagtccgag
gtccgcagcgagttcctcaacaagctcgccaagggccaggtgcgctccggcgtcgtctcc
tcgatcgtcaacttcggtgcattcgtcgacctcggcggcgtggacggtctggtgcacgtc
tccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgaggtgggccaggag
gtcaccgtcgaggtcctcgacgtcgacctggaccgcgagcgggtgtccctgtcgctgaag
gcgacgcaggaggacccgtggcgtcagttcgcccgcacccaccagatcggccaggtcgtc
ccgggcaaggtcaccaagctcgtcccgttcggtgcgttcgtgcgcgtcgacgagggcatc
gagggcctggtgcacatctcggagctggccgagcgccacgtcgagatccccgagcaggtc
gtccaggtcggcgacgagatcctcgtcaaggtcatcgacatcgacctcgaccgccgtcgc
atctcgctgtcgctcaagcaggccaacgagggcgtcgtcggtgacgaggagcagttcgac
ccggccgcctacggcatggccgcctcctacgacgagcagggcaactacctgtacccggag
ggcttcgaccccgacacgggcgagtggcgtgagggctacgagtcccagcgcgaggagtgg
gagcggcagtacgccgaggcccaggctcgcttcgaggcgcaccgcaagcagatcgcggcc
gccaaggaggccgacgccgaggccgctgctggcggcaactacaccagcgacgactcggcc
gggtccgaccccgccgccaccggtggcaccctggccagcgacgaggccctcgcggccctg
cgcgccaagctcgccggcggggagtga
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