Blastococcus sp. PRF04-17: MVA48_06475
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Entry
MVA48_06475 CDS
T08406
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03030
DNA replication
blap03430
Mismatch repair
blap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MVA48_06475
03430 Mismatch repair
MVA48_06475
03440 Homologous recombination
MVA48_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blap03032
]
MVA48_06475
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_06475
Enzymes [BR:
blap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MVA48_06475
DNA replication proteins [BR:
blap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MVA48_06475
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MVA48_06475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
SPOR
Motif
Other DBs
NCBI-ProteinID:
UOY02990
LinkDB
All DBs
Position
1285430..1287265
Genome browser
AA seq
611 aa
AA seq
DB search
MPSSRVLPRPSAQRYEQVSIEELGTPLLDVTFVVVDLETTGGSPKDSAITEIGAVKVRGG
EVLGEFQTLVDPGCEIPPYISVLTGITSMMVATAPRIGTVLPAFLEFARGAVLVAHNAPF
DLGFLKAACAQNGVTWPPAASVDTAVLARRLLSRDEVPNCKLATLAPYFSATTSPTHRAL
DDAKATVDVLHGLFERLGPLGITTLEELTGLTRQVDPERLRKRHLADGVPRGPGVYLFRG
PRDEPLYVGTSNDLRSRVRSYFSSGEQRSRITEMVALAQRVDAISCAHDLEAAVRELRLI
ARHKPRYNRRSRYPERALWLRLTDEPFPRLSVVRRVRPGAGVFLGPFPDRRAADAAMAAV
HESLPLRQCTSRIPVRAPSGAACALAGMGRCGAPCTGAQSVDEYASIAAVFRAAVHQDAR
DLVAPLLARVDRLAAEERYEDAAVLRDRVAVLVRAVRRRQRLESLAAVLELVIARPDGSG
GWHLSVVREGRLVAAGTAPVGTSVRGRLPGLLATAETLPGPDDEHATSVDETELVLRWME
KPGTRLVELTGTLACPAPGTGPFTRFLDRVESGRSGRDPFADGRSLGTRTRPERVSAGAG
VRPGAPIASPA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcctcccgcgtgctgccgcgtccctccgcacagcggtacgagcaggtgtccatc
gaggaacttgggacgccgctcctcgacgtcaccttcgtcgtggtcgacctcgagacgaca
ggcggctcccccaaggacagcgccatcaccgagatcggcgccgtgaaggtgcggggcggc
gaggtcctgggcgagttccagaccctcgtcgacccgggctgcgagatcccgccctacatc
agcgtcctgaccggcatcacgtcgatgatggtggccacggctccgcgcatcggcaccgtg
ctcccggcgttcctggagttcgcgcggggtgcggtgctggtggcgcacaacgcaccgttc
gacctcggcttcctcaaggcggcgtgcgcccagaacggcgtcacctggcccccggcagcc
tcggtcgacacggccgtgctcgcccgccggctgctcagccgcgacgaggtacccaattgc
aagctggccacgctggccccgtacttctcggcgaccacgtcgcccacccaccgtgcgctc
gacgacgcgaaggccaccgtcgacgtcctccacggcctgttcgagcgcctcggcccgctc
ggcatcacgacgctggaggagctcaccggcctgacccggcaggtcgaccccgagcggctg
cgcaagcgccacctcgccgacggcgtgccccgcgggccgggggtctacctcttccgcggc
ccccgtgacgagccgctgtacgtaggcacgtccaacgacctgcgcagccgggtgcgcagc
tacttctcctccggcgagcagcgcagccggatcaccgagatggtcgcgctggcccagcgc
gtcgacgccatctcctgcgcccacgacctcgaggccgccgtgcgggagctgcggctcatc
gcccggcacaagccccggtacaaccgccggtcgcgctaccccgagcgcgcgctgtggctg
cggctgaccgacgagccgttcccgcggctgtcggtggtccgccgcgtgcggccgggagcc
ggtgtcttcctgggcccgttccccgaccgtcgcgccgccgacgccgcgatggccgcggtc
cacgagtcgctccccctgcgccagtgcacgagccgcatcccggtccgcgccccgtcgggc
gcggcgtgcgcactggccggcatgggccgctgcggcgcgccgtgcacgggcgcgcaatcg
gtcgacgagtacgcgtcgatcgcggcggtcttccgggcggcggtgcaccaggacgcgcgt
gacctggtcgctccgctgctcgcgcgggtggatcggctcgccgccgaggagcgctacgag
gacgccgcggtgctccgcgaccgcgtcgccgtcctcgtccgggccgtgcgccgccgtcaa
cggctggagtcgcttgccgccgtcctcgagctcgtcatcgcccgcccggacgggtcgggc
ggctggcatctgtcggtggtgcgcgagggccggctggtcgccgccggcaccgcaccggtg
gggacgtcggtgcgcggcaggctgcccggcctgctggcgaccgccgagaccctgcccggc
cccgacgacgagcacgccacgtcggtcgacgagaccgaactggtgctgcgctggatggag
aagcccggcacccggctcgtcgagctcaccggcaccctcgcctgcccggcgccgggcacc
gggcccttcacccggttcctcgaccgcgtcgagagcggccgctccgggcgcgacccgttc
gccgacggccgctcgctgggcacgcggacccggccggagcgcgtctccgcgggggcgggc
gtgcggcccggcgccccgatagcatcgccggcgtga
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