Blastococcus sp. PRF04-17: MVA48_08980
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Entry
MVA48_08980 CDS
T08406
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MVA48_08980 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blap03019
]
MVA48_08980 (orn)
03009 Ribosome biogenesis [BR:
blap03009
]
MVA48_08980 (orn)
Messenger RNA biogenesis [BR:
blap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MVA48_08980 (orn)
Ribosome biogenesis [BR:
blap03009
]
Eukaryotic type
Pre-60S particles
RNases
MVA48_08980 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UOY03443
LinkDB
All DBs
Position
1770039..1770716
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AA seq
225 aa
AA seq
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MAESAGHLVWIDCEMTGLDLVKDKLIEVAVVVTDSELNVLDKGLDLIISAGDADLDGMDE
VVVEMHRKSGLTDAVRASTLTVAEAEQQLLAYIKQWVPERRTAPLCGNSIGTDRGFLARD
MPELDDHLHYRMVDVSSIKELARRWFPRVYFAQPPKGLAHRALADIIESIRELAYYRRTL
FVPAPGPNSDQAKGAADEVIGSFAGILAAGDATPEGAAPPVASEG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagagcgcagggcacctcgtctggatcgactgcgagatgacgggcctggacctc
gtcaaggacaagctgatcgaggtcgcggtggtcgtcaccgacagcgagctcaacgtcctg
gacaagggcctggacctgatcatctccgccggcgacgccgatctcgacggcatggacgag
gtcgtcgtcgagatgcaccggaagtcggggctgaccgacgccgtgcgcgcctccaccctc
accgtcgccgaggcggagcagcagctgctcgcctacatcaagcagtgggtgcccgagcgc
cggaccgccccgctgtgcggcaactcgatcggcaccgaccgcggcttcctcgcccgggac
atgcccgagctcgacgaccacctgcactaccggatggtcgacgtctcctcgatcaaggag
ctcgcccgccgctggttcccgcgcgtgtacttcgcccagccgccgaagggcctggcccac
cgcgccctcgccgacatcatcgagtcgatccgggagctggcgtactaccggcgaaccctg
ttcgtgccggccccgggtccgaacagcgaccaggcgaagggcgccgccgacgaggtcatc
ggctcgttcgcgggaatcctggcggcaggcgacgccaccccggagggggccgctcccccg
gtcgcgtcggagggctga
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