Blastococcus sp. PRF04-17: MVA48_10365
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Entry
MVA48_10365 CDS
T08406
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MVA48_10365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_10365
Enzymes [BR:
blap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MVA48_10365
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVA48_10365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PDDEXK_1
AAA_22
AAA_16
SH3_18
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOY03698
LinkDB
All DBs
Position
complement(2032811..2036065)
Genome browser
AA seq
1084 aa
AA seq
DB search
MNAFDVCGPLPTGTTVLEASAGTGKTFTIAALTARYVAEGAAELSQIMLVTFGNAASREL
RDRVRERLVSAERGLRDPDTARRNERDPILQLLADVPDDEVERRRQRLARALAGFDEATI
ATTHSFCSQMLAGLGMAADADPTAVFVEDIDDLVREVVDDLYVRTFAGSADPPFLSHAEL
LELGRRAVGSDRQATLWPLTDEGQAGRRRRAAAAVRREVERRKRAVGLVDYEDWLSLLRD
ALTDDTSGPVACERVAARYRVVMVDEFQDTDPVQWEILERAFHGRTTLVLIGDPKQAIYA
FRGGDVTTYLAAAAEATTEATLGTNWRSDAPLLGALDLLFGGAALGHERIVVRPVDAAHP
EARLTGAGAPLRLRRLERTGHGRMWQGLPSVARLRDAVACDVAADVVDLLSGDSQYEGRP
VRPGDLAVLVRTNAQGHLVRETLGRAGVPAVFAGGGSVFSTPSATSWLRLLEALEQPHRA
GRVRSAALSIFLGHDEHSLGAVGDEIADELGPQLRRWADVLSDRGVAACLEALTAETGLP
ERALARPDGERVLTDLRHIGQVLHAAAQRESLGLTALVEWLRRRIAQASVEGADERSRRL
ESDAAAVQIMTVHVSKGLEFPVVYVPFGWDRWTPDNPQVLRLHDDQGQRVLDVGGTAGRG
YAEARGRHEAEESGEDLRLLYVALTRARCQVIAHWAPSSNTAAAPLNRLLFGAAGPGAEP
AARVQPPADDDVAAALAALSARSAGRIEVADVSGRAVPRWEPPRTPAPELSVSSFTRTLD
DDWRRTSYSALTRSAHDAAHEQHFASEPDLPGTDDERDTETSLEAPPTDALASPLTDLPG
GAAFGTLVHAVMEDLDPKALDERCAQAVARHLVPGVTAEALAAGLRPVLATPLGDLGLPL
AAIAAADRLAELDFELPLAGGDDAVPHATLADVVDLLRRYDLGPLAGYPDLLAAVTPQAL
RGFLTGSIDAVLRLPGPVFAVVDYKTNRLGAEPLTTWHYRPEAMAEEMQRAHYVLQALLY
CVALHRYLRWRLPGYDPDRHIGPVLYLFVRGMAGAATPLGAGVFTWIPPAGLVPELSDLL
AGRP
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccttcgatgtctgcggcccgctgccgaccggcacgacggtgctggaggcgagc
gccggcaccggcaagacgttcaccatcgccgcgctcaccgcgcgctacgtcgccgaggga
gcggccgagctgtcacagatcatgctggtcaccttcggaaacgccgcgtcacgcgaactc
cgtgaccgggtgcgtgagcgcctggtgtccgccgagcgcggcctgcgcgaccccgacacc
gcccggaggaacgagcgcgacccgatcctgcaactgctcgccgacgtacccgacgacgag
gtggagcgccggcggcagcggctcgctcgggcgctggccggcttcgacgaggcgacgatc
gccaccacccactcgttctgctcgcagatgctggctgggctcggcatggcagccgacgcc
gaccccactgccgtgttcgtcgaggacatcgacgacctcgtgcgcgaggtagtcgacgac
ctctacgtgcgcaccttcgccggctccgccgacccgcccttcctctcccacgccgagctg
ctggaactcggccgccgtgcggtgggcagcgaccggcaggcgacgctgtggccgctgacc
gacgaggggcaggccggccggcgccgccgcgccgcggccgccgtccgccgcgaggtggag
cgccgcaagcgggccgtggggctggtcgactacgaggactggctctcgctgctgcgcgac
gccctcaccgacgacacctcggggccggtggcgtgcgagcgggtggctgcccggtaccgg
gtggtgatggtggacgagttccaggacaccgacccggtgcagtgggagatcctggagcgc
gcgttccacggccgcaccacgctcgtgttgatcggcgatcccaagcaggcgatctacgcc
ttccgcgggggtgacgtcaccacgtaccttgccgccgctgccgaggcgaccaccgaggca
accctcggcaccaactggcgcagcgacgcgccgctgctgggcgcgctggacctgctcttc
ggcggcgcagccctcgggcacgagcggatcgtcgtccggcctgtcgacgcggcccatccg
gaggcgcggctcaccggggccggtgcaccgctgcgtctgcggcggctggagcgcaccggc
cacggccggatgtggcagggcctgccctcggtcgcccggctccgcgacgccgtcgcctgt
gacgtggcggccgacgtcgtcgacctgctgtccggcgactctcagtacgaggggcggccg
gtgcgccccggcgatctggcggtgctcgtgcgcaccaacgcccagggacacctcgtgcgc
gagacgctggggcgcgccggggtgccggccgtgttcgccggcggcggcagcgtcttctcc
acaccgagcgccacttcctggctgcgcctgctggaggcgctggagcagccgcaccgggcc
ggccgggtgcgctccgcagcgctgtcgatcttcctcgggcacgacgagcactccctgggc
gccgtaggcgatgagatcgccgacgagctcggcccgcagctgcgccggtgggcggacgta
ctgagcgaccgcggggtggccgcctgcctcgaggcgctgaccgccgagaccggtctgccc
gagcgcgcgctggcccggccggacggagagcgggtgctcaccgacctgcggcacatcggc
caggtgctgcacgcggcggcgcagcgcgagtcgctgggcctgaccgcgctcgtcgagtgg
ctgcggcggcgcatcgcccaggcctcggtcgagggcgccgatgagcgcagccggcgtctg
gaatccgacgcggccgccgtccagatcatgaccgtccatgtgagcaaaggcctggagttt
cccgtcgtctacgtgcccttcggctgggaccggtggaccccggacaacccgcaggtgctg
cggctgcacgacgaccaggggcagcgagtgctcgacgtcggcgggacggccggccgtggc
tacgccgaagcgcgcggccggcacgaggccgaggagtccggcgaggacctgcggctgctg
tacgtggcgctcacccgcgcccgctgccaggtcatcgcccactgggcgcccagcagcaac
accgccgccgctccactgaaccggctgctgttcggcgcggccggtccgggcgccgagccg
gccgcccgcgtgcagccgcccgccgacgacgacgtcgcggccgccctcgccgcgctgtcg
gcccggtccgccggccgcatcgaggtcgccgacgtgagtggccgcgcggtgccgcgctgg
gagccgccgcgcacgccggctcccgagctgtcggtcagcagcttcacgcgcacgctcgac
gacgactggcggcggacctcctacagcgcgctcacgcgcagtgcccacgacgcggcgcac
gaacagcacttcgccagcgagcccgaccttccgggcacggacgacgagcgcgacacggag
acctcgctcgaggcgccgcccaccgacgcgctggcgtccccgctcaccgatcttcccggc
ggggcggccttcggcaccctcgtgcacgccgtgatggaggacctcgaccccaaggcgctg
gatgagcggtgcgcccaggcggtcgcccgccacctcgtgcccggcgtcacggccgaggcg
ctcgcggccggcctgcggccggtgctcgccaccccgctcggggacctcgggctcccactg
gccgcgatcgccgccgccgacaggctggccgaactcgacttcgagctgccgctggccggt
ggcgacgacgccgtgccgcacgcaacgttggccgacgtcgtggacctgctgcggcgctac
gacctggggccgctcgccggctaccccgacctgctggccgcagtgactccgcaggcgctg
cgcggatttctcaccggcagcatcgacgccgtcctccggctgcccggaccggtcttcgcc
gtcgtcgactacaagaccaaccggctcggcgccgagccgttgaccacgtggcactaccgc
ccagaggccatggccgaggagatgcagcgcgctcactacgtgctccaggcgctgctctac
tgcgtggccctgcaccgctacctgcgctggcggctgcccggatacgacccggaccggcac
atcgggccggtgctgtacctgttcgtccgtggcatggcgggcgcggccaccccgcttggt
gcgggtgtcttcacctggattccaccggccgggctggtgcctgagctctcggacctgctg
gcggggcgaccgtga
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