Blastococcus sp. PRF04-17: MVA48_11980
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Entry
MVA48_11980 CDS
T08406
Name
(GenBank) PKD domain-containing protein
Organism
blap
Blastococcus sp. PRF04-17
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Paralog
GFIT
Motif
Pfam:
PKD_4
Laminin_G_3
PKD
K319L-like_PKD
Laminin_G_1
Laminin_G_2
Big_13
DUF5122
Rax2
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
UOX99769
LinkDB
All DBs
Position
complement(2354326..2357889)
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AA seq
1187 aa
AA seq
DB search
MNRGDMGPRADSPLTRFCALAASQLLIAGMLALLAPEGARADSAPPQAGPANPTTVSADA
LPTVQINGVAWDQVAIGNTVYVVGSFTRARPAGAAAGQQESVRNHILAYDITTGALVTSF
APSLNAQALSITASPDGSRLYVGGDFTTVNGSVRNRVAALTPAGALVDTFRPSVNSQVRA
LAATNSTLYMGGSITAVGGVSRNRLAAVSTANGALLPWAPQPGVGPTSGNRDGNTNTSNA
VMALVVTGGGNQVVAAGRFDSMNGVKATGVAALDPVSGANRPFAINQLITNQGVNSAIYS
LSTDGTTVYGSGYDYYGPGNVEGNFAATADGGNLIVINDCRGDTYDTYPMHGALYVASHT
HNCDSIGGQIEQNPRVEKRGTAYTTTPTTVVRWGTHVNWVGKPAGTQLAWNPEIASGTYT
GQYQGSWSVTGNGRYVSYGGEFPRVNGRAQQGLVRFAMPDIAPNAVGPQTSGFSAAAVVS
APGVARISWRETWDYDNEHLTYRVFRDGGTTPIHTVTRASRWWNLEYGGFSDVGRTGTHS
YRVSASDPFGNTVQTSSVSVTVPAGSATARPYAGVVAADGATDHWPLGEASGTTAFAGIG
GNDLTVGSGVTRGSGGAISGDPNTATTFDGTSASAAAAQRLVQAPSEFSVEAWFRTTSTG
GGKIVGFGNSNTGTSSVYDRHVYMDTSGRVLFGVTETNQRRVIQSGTGLNDGNWHHVVAT
LSNAGMMLYVDGVRVATRASTTVGPNYYGYWRVGGDSTWSGSQWFDGRIDEVAVYPTALS
QSQVAGHHTAGTSGGPVNQPPSASFTATPTDLTVAVNAAASTDADGTITSYAWNWGDGSP
VETTTGPSASHSYAAGGTRTITLTVRDDAGATGTTTRTVTLTAPDVPPVAQFTETVTGLD
VAFDGGGSNEPGGGPLASWAWDFGDGSVRTSSGPTTSHTYAAGGTYTVTLTVTDDDGQTG
TTSHPVTVSGTPGPAVLATDTFNRTVSGGLGTADVGGPWTVWQGGTRQSVSPGAASFALP
GAGNNTASYLNGVSQTSAEVLTSFSVSSVATGSGTYVYVGGRFVATLQAYRVRVRLMADG
RVALALSRYSDGGEAFPGGELIVPGLTYAPGTTLQARVLVTGTNPTRIAATVWREGTTEP
SAPQMTWTDTTAQLQVPGGFSLMAHRPSNTTAATTVQFTSFIARVGP
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccggggagacatgggaccacgtgccgacagcccgctcacccggttctgcgcactc
gccgcgagccagctgctgatcgccgggatgctggcgctgctcgcgcccgagggggcgcgc
gccgactccgccccgccccaggccggccccgccaaccccaccaccgtgtcggccgatgcg
ctgccgaccgtgcagatcaacggcgtcgcctgggaccaggtcgccatcgggaacaccgtg
tacgtggtcggctcgttcacgcgggcccgcccggccggggcggccgccggccagcaggag
tcggtgcgcaaccacatcctggcctacgacatcacgaccggcgcgctggtcacgtccttc
gcgcccagcctcaacgcccaggcgctgtccatcaccgcctctcccgacggctcacggctc
tacgtgggcggcgacttcacgaccgtgaacggctcggtgcgcaaccgcgtggcggccctc
acgccggcgggcgccctggtcgacaccttccgccccagcgtcaactcacaggtgcgggct
ctcgcggcgaccaacagcaccctgtacatgggcggcagcatcaccgcggtgggcggggtc
agccggaaccgcctggccgcggtgtcgacggccaacggtgcgctgctcccgtgggctccg
cagcccggcgtgggcccgaccagcggcaaccgggacggcaacaccaacacgagcaacgcg
gtcatggcgctggtcgtgaccggcggcggcaaccaggtggtggcggccggccggttcgac
tcgatgaacggcgtcaaggcgaccggcgtggccgcgctggacccggtcagcggcgccaat
cgcccgttcgcgatcaaccagctgatcaccaaccagggcgtcaactccgcgatctacagc
ctctcgaccgacggcaccaccgtgtacggcagcggctacgactactacggcccggggaac
gtggagggcaacttcgcggcgaccgccgacggcggcaacctgatcgtgatcaacgactgc
cgcggggacacgtacgacacctatccgatgcacggcgcgctctacgtcgccagccacacg
cacaactgcgacagcatcggcgggcagatcgagcagaacccgcgggtggagaagcgcggg
accgcctacaccacgacgccgaccacggtggtccgctggggcacccacgtgaactgggtg
ggcaagcccgccggcacccagctcgcgtggaaccccgagatcgcctcgggcacctacacc
ggccagtaccaggggagctggagcgtcaccgggaacggccgctacgtctcctacggcgga
gagttcccgcgggtgaacggccgcgcccagcagggcctggtgcgcttcgcgatgcccgac
atcgcgcccaacgccgtcggcccgcagaccagcggcttcagcgcggccgccgtcgtctcc
gcgcccggcgtcgcgcgcatcagctggcgcgagacctgggactacgacaacgaacacctg
acgtaccgggtgttccgcgacggcggcacgacgccgatccacacggtgacccgggcgtcg
cggtggtggaacctcgagtacggcggcttctccgacgtcggccggaccggcacccactcg
taccgggtgagcgccagcgatccgttcggcaacaccgtccagacgagctcggtctcggtc
accgtcccggccggcagcgcgaccgcccggccctacgccggtgtggtcgccgccgacggc
gccaccgaccactggccgctgggcgaggcctcgggcacgacggcgttcgccggcatcggc
ggcaacgacctcacggtgggctccggcgtcacccgcggctcgggcggcgcgatcagtggc
gacccgaacaccgcgacgacgttcgacgggacctcggcgagcgccgctgccgcccagcgg
ctcgtgcaggcacccagcgagttcagcgtcgaggcctggttccggacgacgtcgaccggc
ggcggcaagatcgtcggattcggcaactcgaacacggggacgagcagcgtctacgaccgg
cacgtctacatggacacctcggggcgggtcctgttcggggtcaccgagaccaaccagcgc
cgggtcatccagagcggaaccggcctcaacgacggcaactggcaccatgtcgtggccacg
ttgagcaacgccgggatgatgctctacgtcgacggcgtccgggtggccacccgggccagc
accaccgtggggccgaactactacggctactggcgcgtcggcggggactccacgtggagc
ggctcgcagtggttcgacggccggatcgacgaggtcgccgtctacccgacggcgctcagc
cagagccaggtcgccggccaccacaccgccggcaccagcggcgggccggtcaaccagccg
ccgtcggcctcgttcaccgcgacgccgacggatctgaccgtcgccgtgaacgccgccgcg
tcgaccgatgccgacggcaccatcaccagctacgcgtggaactggggtgacggctcgccg
gtggagaccaccacggggccgtcagcgagccacagctacgccgccggcggcacccggacc
atcaccttgaccgtcagggacgacgccggagcgacgggaacgaccacccggacggtcacg
ctgaccgcgcccgacgtgccgccggtcgcccagttcaccgagacggtcaccgggctcgac
gtggccttcgacgggggcgggtccaacgagcccgggggtggtccgctcgcctcgtgggcg
tgggacttcggcgacgggagcgtccgcaccagcagcggcccgaccacctcgcacacctac
gcggccggcgggacctacaccgtgaccctcaccgtcaccgacgacgacgggcagacgggt
accaccagtcaccccgtgaccgtcagcgggacgcccggacccgccgtgctggccaccgac
acgttcaaccggacggtcagcgggggcctcggcacggcggacgtgggtggcccgtggacg
gtgtggcagggcggcacccgccagtccgtgtcgccgggtgcggcctcgttcgcgctgccc
ggagccggcaacaacacggcctcgtacttgaacggagtgtcgcagaccagcgcggaggtc
ctgacgtcgttctcggtcagctcggtggccaccgggtcgggcacctacgtctacgtgggc
ggccggttcgtcgcgactctccaggcctaccgcgtccgggtgcgactcatggccgacgga
cgggtggcgctggcgctgtcccgctactccgacggcggtgaggcgttcccgggtggggag
ctgatcgtgccggggctgacctacgcaccagggacgacgctgcaggcgcgggtcctggtc
acggggaccaaccccacgcggatcgccgcgacggtctggcgcgaggggacgaccgagccg
tccgcgccgcagatgacgtggacggacaccacggcgcagctgcaggtgcccggtggcttc
agcctcatggctcaccggccgagcaacacgaccgcggccacgacggtccagttcacgtcc
ttcatcgcccgtgtgggcccctga
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