Blastococcus sp. PRF04-17: MVA48_15430
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Entry
MVA48_15430 CDS
T08406
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MVA48_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_15430
Enzymes [BR:
blap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MVA48_15430
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MVA48_15430
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MVA48_15430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
DUF294_C
Cys_rich_KTR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UOY00389
LinkDB
All DBs
Position
complement(3054234..3055025)
Genome browser
AA seq
263 aa
AA seq
DB search
MITRVDLAAVQAIKTFDPPLTALAGLEVTGASRHGKFLDIDVSGLHLVVHLARAGWVHWR
SNLPPAPPKPGKGPLAVRIHLEEGEGFDLTEAGTRKSLAVYLVRSPSEVPGIGRLGPDAL
QVDRETFAILLKGRSGQLKGALTDQTLVAGIGNAYSDEILHAAHLSPFKMADKLSDDELV
RLFDAMRATLTDALDRQVGQKAATLKGEKRSGLMVHARTGLPCPVCGDTVREVSFADTSL
QYCPTCQTGGKPLADRRLSKLLR
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgcgggtcgacctggccgccgtccaggcgatcaagactttcgacccgccgctg
accgcgctcgccgggctggaggtcaccggcgcgagccggcacggcaagttcctcgacatc
gacgtctcgggcctgcacctcgtcgtccacctggcgcgggcgggctgggtgcactggcgg
agcaacctgccgccggcgccgcccaagccgggcaagggaccgctcgccgtccgcatccac
ctcgaggaaggtgagggcttcgacctgaccgaggccgggacgcgcaagagcctggcggtc
tacctggtccggtcgccgtccgaggtgccgggcatcggccggctggggccggacgcgctg
caggtcgaccgcgagacgttcgcgatcctgctgaagggccggtcggggcagctcaagggc
gcgctcaccgaccagacgctcgtcgccggcatcggcaacgcgtactccgacgagatcctg
cacgccgcccacctgtcgccgttcaagatggccgacaagctcagcgacgacgaactggtc
cgtctcttcgacgcgatgcgggcgacgctgaccgacgcgctcgaccgccaggtcggccag
aaggcggcgacgctcaagggcgagaagcggtcggggctgatggtgcacgcccgcaccggg
ctgccgtgcccggtctgcggcgacaccgtccgcgaggtcagcttcgccgacacctccctg
cagtactgcccgacctgccagaccggcggcaagccgctcgccgaccgccggctgtcgaag
ctgctgcgctga
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