Blastococcus sp. PRF04-17: MVA48_19930
Help
Entry
MVA48_19930 CDS
T08406
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
blap
Blastococcus sp. PRF04-17
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_19930
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MVA48_19930
Archaeal homologous recombinant proteins
MVA48_19930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_21
ABC_tran
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UOY01198
LinkDB
All DBs
Position
3921201..3924161
Genome browser
AA seq
986 aa
AA seq
DB search
MRLHRLSLTAFGPFAGTEEVDFDEVGRDGLFLLWGPTGAGKTTLLDAVVFALYGSVPGPR
GEEKRLRSDHASDGTRTEVSCELTLGPERLLVTRRPEQQRPKKRGEGWTTEQAKLTVQRL
TEGGWEPVSTRIDEGSEHLRTRLGLDVHQFCQVVLLPQGDFARFLRAEPEQRGELLRTLF
DVDRFAAAEAWLADERARVRDAVAVQRAGMSSLLARVAQVADADIPEGLAPELVGSGGGA
AVAPWVSALRSTASIRLSAAEERAGAAAAEASAVDAELAAARALAERHARRDRAIAELAS
RTAREADLVPLRAERDAGRRAEPLRDVLEAAGRTALTAEQAAGVLDGARRAWTAVAAGRE
GTAAVARDLRDEAAAARALLPEVDRAADLTGRIGVLDRRIAALQRSCEASSATAASLPGR
LADQERVVAGAQAAATRLPALRASLAAAQAALEAARAAERLEAALGTARDAVQARRVAWS
DARERWLDLRAQRLDGMAAELATSLTDGADCPVCGATEHPRPASHDGPVVTADDERAAAE
AADRAEQQLTAAAADLDRQERELVALRARAGEEPLGAQAAALEELRADERSTARLAAGLE
PALAALELLLAEREDATARLAADREQLGARTAERETLAVGLAQLTDRLAEARGEDPDLAA
RVLRLTDAAARCEALVAAEADEVRARAAADTARLAAEERATDAGFDDLLDAAAALLDRGR
LAAIDRELDGHDQAVAVLRARLAEPELADLEPRPDVAGLEERCASITRRREEAVAELERA
GRCAQALEGLAGDVTAAEVELSELRAWADQVTALADLVHGRGSNTLRMRLQSFVLAARLE
QVAEVASRRLLEMSGGRYTFLHSDAQGRHGARGGLGLDVFDEYTGVRRPTKTLSGGESFM
ASLALALGLADVVTAESGGVQLDTLFVDEGFGTLDPQALDAVMTVLDELRRGGRTVGVIS
HVEELRTRIPSRLQIIAGREGSRLAS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccggctctcgctcaccgccttcggcccgttcgccggcaccgaggaggtc
gacttcgacgaggtcggccgcgacggcctgttcctgctgtgggggccgaccggcgccggc
aagacgacgctgctcgacgccgtcgtcttcgcgctgtacggcagcgttccgggcccgcgc
ggcgaggagaagcggctgcgcagcgaccacgcgtccgacggcacccgcaccgaggtctcc
tgcgagctgacgctgggtcccgagcggctgctcgtcacccggcgtcccgagcagcagcgc
ccgaagaagcgcggcgagggctggaccaccgagcaggccaagctgaccgtgcagcggctc
accgagggcggctgggaaccggtcagcacccgcatcgacgagggctccgagcacctgcgc
acccggctcgggctcgacgtgcaccagttctgccaggtggtcctgctgccgcagggcgac
ttcgcccgtttcctccgggccgagccggagcagcgcggcgagctgctgcgcaccctgttc
gacgtcgaccggttcgccgccgccgaggcgtggctcgccgacgagcgggcccgtgtgcgc
gacgcggtggccgtccagcgcgcgggcatgagctcgctgctggcgcgggtggcccaggtc
gccgacgccgacatcccggaagggctggcccctgagctcgtcggcagcgggggtggcgcc
gcggtggccccgtgggtgtccgcgctccgctcgaccgcgtcgatccggctgtccgcagcc
gaggaacgcgccggggcggcggctgcggaggcgtccgccgtcgacgccgagctcgccgcg
gcgcgtgcgctcgccgagcggcacgcgcgacgcgaccgggcgatcgccgagctggcgtcc
cgcaccgcccgggaggccgacctcgtgccgctgcgggccgagcgcgacgccggtcgccgc
gccgagccgctgcgcgacgtcctcgaggcggcggggcgcaccgcgctgaccgcggagcag
gcggccggcgtcctcgacggcgcccggcgcgcctggacggccgtggccgccggccgcgag
ggaaccgcggccgtggcccgggacctgcgcgacgaggcggccgcggcgcgtgcgctgctg
cccgaggtcgaccgggccgccgacctgaccggccggatcggcgtcctggaccggcgcatc
gccgcgttgcagaggtcctgcgaggcgagcagcgccacggcggcctcgctgccgggccgg
ctcgcggaccaggagcgcgtcgtcgccggggcgcaggccgcggcgacccgactgcccgcc
ctgcgcgcctcgctggccgccgcgcaggccgcactcgaggcggcccgggcggccgagcgc
ctggaggcggccctcggcaccgcccgggacgcggtgcaggcgcggcgggtggcctggtcc
gacgcccgggagcgctggctggacctccgcgcccagcggctcgacggcatggccgccgag
ctcgccacctccctgaccgacggcgcggactgccccgtctgcggcgccacggagcacccc
cggcccgcctcgcacgacgggcccgtcgtgacggccgacgacgagcgggccgcggcggag
gcagccgaccgggcggagcagcagctcaccgctgcggccgccgacctggatcggcaggag
cgcgagctcgtggccctgcgggcccgggcgggggaggagccgctcggagcgcaggccgcg
gccctggaggaacttcgcgccgacgagcggtcgacggcacggctcgccgccggcctggag
cccgcgctggcggcgctggagctgctgctcgccgagcgcgaggatgccacggcccgcctc
gccgccgaccgggagcagctcggcgcgcgcaccgccgagcgggagacgctggccgtgggg
ctcgcgcaactcaccgatcggctcgccgaggcccgcggcgaggaccccgacctggcggcg
cgcgtgctgcggctcaccgacgccgcagcgcgctgcgaggcactggtcgcagccgaggcc
gacgaggtgcgggcccgcgccgccgccgacacagcacgcctggcggccgaggagcgggcc
accgacgccggcttcgacgacctgctggacgcggccgccgcgctgctcgaccgcgggcgg
ctggccgcgatcgaccgggagctcgacggccacgaccaggcggtggcggtgctgcgcgcc
cggctcgccgagcccgagctggccgacctcgagccgcggcccgacgtcgcgggcctcgag
gagcggtgcgcgtcgatcacccggcggcgcgaggaggcggtcgccgagctcgagcgggcc
ggccgctgcgcccaggccctcgagggcctggccggtgacgtcaccgccgccgaggtcgag
ctgtccgagctgcgcgcctgggccgaccaggtcaccgcgctcgccgatctggtgcacggg
cgcgggtcgaacaccctgcgcatgcggctgcagtccttcgtgctggccgcccgcctggaa
caggtcgccgaggtcgccagccggcggctgctggagatgtcgggtggccgctacaccttc
ctgcacagcgacgcccaggggcggcacggcgcccgcggcggcctcgggctggacgtcttc
gacgagtacaccggcgtccggcggccgacgaagactctgtcgggcggggagagcttcatg
gcctccctggctctcgcgctcggcctggccgacgtggtcaccgccgagagcggcggcgtg
cagctggacacgctcttcgtcgacgagggcttcggcacgctcgatccgcaggcgctcgac
gcggtcatgaccgtgctcgacgaactgcgccgcggcggccggacggtgggcgtcatcagc
cacgtcgaggagctgcgcacgcggatcccgagccggctgcagatcatcgcgggccgcgag
ggttcccggctcgcctcctga
DBGET
integrated database retrieval system
