Blastococcus sp. PRF04-17: MVA48_20545
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Entry
MVA48_20545 CDS
T08406
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03420
Nucleotide excision repair
blap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MVA48_20545
03430 Mismatch repair
MVA48_20545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blap03400
]
MVA48_20545
Enzymes [BR:
blap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MVA48_20545
DNA repair and recombination proteins [BR:
blap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MVA48_20545
MMR (mismatch excision repair)
Other MMR factors
MVA48_20545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
DUF6484
Motif
Other DBs
NCBI-ProteinID:
UOY01308
LinkDB
All DBs
Position
4043973..4045994
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AA seq
673 aa
AA seq
DB search
MTQTDAARAGAPTRAEAVLDALDDEQRSAAQAVSGPVCILAGAGTGKTRTITHRIAYGVH
TGVYVPEQVLAVTFTARAAGELRGRLAALDVGGVQARTFHAAAMRQLRYFAPRVLGGPMP
GLVENKLRLVASAASRSRLSTDRTSLRDLASEIEWAKTTLATPDDYPARAKAAGREPPFE
AAAVAAVYASYESAKQRDGALDFEDLLLVTAYALEEHPDVARQVRGQYRHFVVDEYQDVN
PLQQRLLDAWLGGRADVCVVGDPNQTIYSFTGADPDYLLGFADRYPDAEVVKLERDYRST
PQVVALANRLIGQAPRRKGLPGLRLLGQRADGVEPTFVEYPDEPAEAAAVAARCRALVDE
GTPAAEIAVLFRINAQSEVYENALTDVGVPYVLKGGERFFERPEVREAVLLLRGAAAGGS
EPGALVPTVRDVLASTGWVEHRPPAGGAARDRWQSLAALVDLAVDLVAENPALDLPGFVA
HLAERANAQHAPTVQGVTLASMHAAKGLEWDAVFVVGLVDGVVPIAQSLSRPEAVEEERR
LLYVAVTRAREQLALSWSLARNPGAKRARPRSRFLTGLAPDSGPTAPAGRRPAKKQKVVL
EGEAGELFERLRAWRSQAAQSASVPAYVVFTDATLQAIAETRPGSLRELSGLPGIGARKL
ELYGADVLAAVSG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaccgacgccgcgcgcgccggcgcccccacccgtgccgaggccgtgctggac
gcgctggacgacgagcagcgcagcgccgcgcaggcggtcagcgggccggtctgcatcctg
gccggggccggaaccggcaagacgcgcacgatcacccaccgcatcgcctacggcgtccac
accggcgtctacgtgcccgagcaggtgctggcggtgaccttcaccgcgcgggcggcgggt
gagctccgcggtcggctggccgcactggacgtcggcggcgtgcaggcccgcaccttccac
gccgcggccatgcgccagctccgctacttcgccccccgggtgctcggcggcccgatgccc
ggcctggtggagaacaagctgcggctggtcgcgtcggcggcgagccgctcgcggctgtcg
accgaccgcaccagcctgcgcgacctcgccagcgagatcgagtgggcgaagacgacgctc
gccacccctgacgactacccggcacgggcgaaggccgccggccgcgagccgccgttcgag
gcggccgccgtggccgcggtctacgcgagctacgagtcggccaagcagcgcgacggcgcc
ctcgacttcgaggacctgctgctggtgaccgcctacgcgctggaggagcaccccgacgtc
gcccgccaggtgcgcgggcagtaccggcacttcgtcgtcgacgagtaccaggacgtcaac
ccgctgcagcagcggctcctggacgcatggctgggcgggcgcgccgacgtctgcgtcgtc
ggggacccgaaccagacgatctacagcttcaccggcgccgaccccgactacctgctcggg
ttcgccgaccgctatcccgacgccgaggtggtcaagctcgagcgcgactaccgctcgacg
cctcaggtggtggccctggccaaccggctgatcggccaggcccccaggcgcaagggcctg
cccggtctgcggctcctcggccagcgggccgacggggtcgagcccaccttcgtcgagtac
cccgacgagccggccgaggccgcggctgtcgccgcccgctgcagggcgctcgtcgacgag
gggacgccggccgccgagatcgccgtcctcttccggatcaacgcccagtccgaggtctac
gagaacgcgctgaccgacgtcggggtgccgtacgtgctcaagggcggggagcggttcttc
gagcgccccgaggtgcgcgaggcggtgctgctgctgcgcggtgccgcggcgggcggcagc
gagccgggagcactggtgcccacggtccgcgacgtcctcgcctccaccggctgggtcgag
caccggccgccggccggcggcgccgcccgcgaccggtggcagtcgctggccgcgctggtg
gatctcgcggtcgacctcgtggccgagaacccggcgctcgacctgcccggcttcgtggcg
cacctggcggagcgcgcgaacgcgcagcacgcgcccaccgtccagggcgtcaccctggcg
tcgatgcacgccgccaagggcctggagtgggacgcggtcttcgtggtggggctcgtcgac
ggcgtcgtcccgatcgcgcagtcgctctcccggcccgaggccgtcgaggaggaacggcgg
ctgctctacgtggcggtcacccgggcccgggagcagctggccctctcgtggtcgctggcc
cgcaacccgggcgcgaagcgggcccggccgcgcagccggttcctcaccgggctggcgccg
gactccggtccgaccgcgcccgccggccggcgcccggcgaagaagcagaaggtcgtgctg
gagggcgaggccggcgagctgttcgagcggctgcgcgcatggcgcagccaggcggcccag
tccgcgtcggtcccggcttacgtcgtgttcaccgacgcgacgctgcaggccatcgcggag
acccgtcccggcagcctccgcgagctgtctggtctgcccgggatcggcgcccgcaagctc
gagctctacggcgcggacgtgctggccgccgtcagcggctga
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