Blastococcus sp. PRF04-17: MVA48_21860
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Entry
MVA48_21860 CDS
T08406
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap02020
Two-component system
blap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MVA48_21860 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MVA48_21860 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blap03021
]
MVA48_21860 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
blap02035
]
MVA48_21860 (whiG)
Transcription machinery [BR:
blap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MVA48_21860 (whiG)
Bacterial motility proteins [BR:
blap02035
]
Flagellar system
Flagellar assembly proteins
Stator
MVA48_21860 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
HTH_23
DUF7557
Motif
Other DBs
NCBI-ProteinID:
UOY01541
LinkDB
All DBs
Position
4294151..4294963
Genome browser
AA seq
270 aa
AA seq
DB search
MPEATIHRLDEYDESQEDADALLAELWNDYVANRDPGLRDRLILHYAPLVKYVAGRVGSG
LPAHVEQADLISYGTFGLIDAITRFEPTREVKFESYAMARIRGAIIDELRNTDWIPRSVR
MKARQFERAVAELEGRLQRTPTDEEVAAEMDMDVEEVRKFLGQLSLVNVVALDELLTDDE
GGGAPRLGDTLQDSSALDPQAMAEHGEARQLLARAVEQLPEREKVVVSLYYFEGLTLADI
GRVLGVTESRICQLHTKAVLHLRTKLADIA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaggccaccatccaccggctggacgagtacgacgagtcgcaggaggacgccgac
gcgctgctcgcggagctgtggaacgactacgtcgccaaccgggacccgggtctgcgtgac
cggctgatcctgcactacgcgccgctggtgaagtatgtcgccggtcgggtcggcagcggc
ctgcccgcgcacgtcgagcaggccgacctcatctcctacggcacgttcgggctcatcgac
gccatcacccgcttcgaaccgacccgcgaggtcaagttcgagagctacgcgatggcccgc
atccggggcgcgatcatcgacgagctccgcaacaccgactggatcccgcgctcggtgcgc
atgaaggcccggcagttcgagcgcgcggtcgccgagctcgagggccggctgcagcgcacg
ccgaccgacgaagaggtcgcggccgagatggacatggacgtcgaggaggtccgcaagttc
ctcggccagctgtccctggtcaacgtcgtcgctctcgacgagctgctcaccgacgacgag
ggcggcggcgccccgcgcctcggcgacaccctccaggactccagcgccctcgacccgcag
gccatggccgagcacggtgaggcccgccagctcctggcccgcgccgtcgagcagctgccc
gagcgcgagaaggtcgtcgtcagcctctactacttcgagggcctcaccctggccgacatc
ggccgcgtcctcggcgtcaccgagagccgcatctgccagctgcacaccaaggccgtcctg
cacctgcgcaccaagctggccgacatcgcctga
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