Blastococcus sp. PRF04-17: MVA48_22095
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Entry
MVA48_22095 CDS
T08406
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
blap
Blastococcus sp. PRF04-17
Pathway
blap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MVA48_22095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blap03019
]
MVA48_22095
03016 Transfer RNA biogenesis [BR:
blap03016
]
MVA48_22095
Enzymes [BR:
blap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MVA48_22095
Messenger RNA biogenesis [BR:
blap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MVA48_22095
Transfer RNA biogenesis [BR:
blap03016
]
Prokaryotic type
tRNA degradation factors
MVA48_22095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_NusA_1st
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UOY01584
LinkDB
All DBs
Position
4333725..4335974
Genome browser
AA seq
749 aa
AA seq
DB search
MSAPTITAEFDAEDGVTTATAVIDNGSFGSRSVTFETGRLARQAAGSVVVTMGDTMLLSA
TTAGRQPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPTF
AKGLRNEVQVVITVMSLDPAHLYDVLAINGASASTQLSGLPFSGPVGGTRVALINGQWVG
FPTHAELEDAVFDMVVAGRVLPDGDVAIMMVEAEATEKTIALVAGGAPAPTEEIVAQGLE
AAKPFIKALCDAQSALAAKAAKPVAEFPRFLDYQDDVYAAVEAEVGDRLAQAQQIAGKHE
REDATDALKDEVKAALAGRFEGREKEISGAFRALTKKVVRQRILREKVRIDGRGLTDIRP
LSAEVEVIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPETRKRYMHNYNFPPYS
TGETGRVGSPKRREIGHGALAERALVPVLPDREEFPYAIRQVSEALGSNGSTSMGSVCAS
TLALLNAGVPLKAPVAGIAMGLVSDEVDGKTEYVALTDILGAEDAFGDMDFKVAGTRDFV
TALQLDTKLDGIPSDVLAGALTQARAARLHILDVMNEAIDAPDEMSPYAPRVTTVRIPVD
KIGAVIGPKGQMINAIQDETGADITIEDDGTIYVGASDGPSAQAAVDRINAIANPQMPKV
GERFLGTVVKTTPFGAFVSLLPGKDGLVHISKLGGGKRIGKVEDVANVGDKMQVEITDID
ARGKISLVPVAAEGEGAPAAEPAAAPAGE
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcacccaccatcaccgcagagttcgacgccgaggacggcgtcaccaccgccacc
gcggtcatcgacaacggcagcttcggcagccgctccgtcacgttcgagaccggccgcctc
gcccgtcaggccgccggctccgtcgtcgtcaccatgggcgacaccatgctgctgtcggcc
accacggccggccggcagcccaaggagcagttcgacttcttcccgctcacggtcgacgtc
gaggagcggatgtacgccgccgggcgcatccccggctcgttcttccgtcgcgagggccgg
ccgtcggaggacgcgatcctcacctgccgcctgatcgaccgcccgctgcgcccgaccttc
gccaagggcctgcgcaacgaggtccaggtcgtgatcacggtcatgtcgctggacccggcc
cacctgtacgacgtcctcgcgatcaacggcgcctcggcgtccacccagctctccggcctg
ccgttctccggtccggtcggcggcacgcgcgtcgcgctcatcaacggccagtgggtcggc
ttcccgacccacgccgagctcgaggacgccgtcttcgacatggtcgtggccggccgggtc
ctgcccgacggcgacgtggcgatcatgatggtcgaggccgaggcgaccgagaagacgatc
gcgctggtcgccggcggcgcccccgccccgaccgaggagatcgtggcgcagggcctcgag
gcggccaagccgttcatcaaggcgctctgcgacgcgcagtccgccctggccgccaaggcg
gccaagccggtcgccgagttcccgcgtttcctggactaccaggacgacgtctacgccgcc
gtcgaggccgaggtcggcgaccgcctcgcgcaggcgcagcagatcgccggcaagcacgag
cgcgaggacgccaccgacgccctcaaggacgaggtcaaggccgcgctggccggccggttc
gagggccgcgagaaggagatctccggagccttccgagcgctgaccaagaaggtcgtccgc
cagcgcatcctgcgcgagaaggttcgcatcgacggccgcggcctgaccgacatccggccg
ctgtcggccgaggtcgaggtcatcccgcgggtgcacggctcggccctgttcgagcgcggc
gagacccagatcctcggtgtcaccacgctcaacatgctccgcatggagcagcagctggac
acgctctcgcccgagacgcgcaagcggtacatgcacaactacaacttcccgccgtactcc
accggtgagaccggccgcgtgggctcgcccaagcgccgcgagatcggccacggcgccctg
gccgagcgggcgctcgtcccggtgctgcccgaccgcgaggagttcccctacgcgatccgg
caggtctccgaggcgctgggctccaacggctcgacgtccatgggctcggtctgcgcctcc
accctggcgctgctcaacgccggtgtgccgctcaaggcaccggttgcgggcatcgccatg
ggcctggtctccgacgaggtcgacggcaagaccgagtacgtcgcattgaccgacatcctg
ggggccgaggacgcctttggcgacatggacttcaaggtcgccggcacgcgggacttcgtc
accgcgctgcagctggacaccaagctggacggcatcccgtcggacgtgctggccggtgcg
ctgacccaggcccgcgccgcccgcctgcacatcctcgacgtgatgaacgaggccatcgac
gcccccgacgagatgagcccctacgccccgcgggtgaccacggtgcgcatccccgtcgac
aagatcggcgcggtcatcggccccaagggccagatgatcaacgccatccaggacgagacc
ggcgcggacatcaccatcgaggacgacggcacgatctacgtcggcgcctccgatggcccg
tcggcccaggcggcggtcgaccgcatcaacgcgatcgccaacccgcagatgcccaaggtc
ggcgagcgcttcctcggcacggtcgtgaagaccacgccgttcggcgccttcgtctccctg
ctgccgggcaaggacggcctcgtccacatcagcaagctgggtggcggcaagcgcatcggc
aaggtcgaggacgtcgccaacgtgggcgacaagatgcaggtggagatcaccgacatcgac
gcccgcggcaagatcagcctcgtgcccgtcgcggccgagggcgagggcgctccggctgcc
gagccggcagcggcgcccgccggtgagtga
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