Blautia parvula: LC508_02030
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Entry
LC508_02030 CDS
T09421
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
blar
Blautia parvula
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LC508_02030 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blar03021
]
LC508_02030 (rpoD)
Transcription machinery [BR:
blar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LC508_02030 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UBU22166
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All DBs
Position
417065..418189
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AA seq
374 aa
AA seq
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MEMNMAKFSEKLQELVELGKKKKNVLEYQEINDHFKEMPLDPDALDKVFDYLESCGIDVL
RIPESDEDVFIISDDDGINLDEEEEVDVENIDLSVPEGVSIEDPVRMYLKEIGKVPLLSA
EEEIELAKRMEEGDEAAKKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEK
FDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREP
QPEEIAEKMDMSVDRVREILKISQEPVSLETPIGEEEDSHLGDFIQDDNVPVPADAAAFT
LLKEQLVEVLNTLTDREQKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKL
RHPSRSRKLKDYLD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaacatggcgaaattcagcgaaaaactgcaggaattggtggagctgggaaag
aaaaagaaaaatgtcctggaatatcaggagatcaatgaccatttcaaggaaatgcccctg
gaccctgacgccctagacaaagtatttgactatctggaatcctgcggtattgacgtgctg
cgcattccggagagcgatgaggatgtttttatcatcagcgatgatgacggcatcaacctg
gacgaggaggaagaggtagatgtggagaatatcgacctttccgttccggaaggtgtcagc
atcgaagatcctgtccgcatgtatttaaaagagatcggcaaggtgccccttctgtccgca
gaggaggaaattgagctggcaaagcgtatggaagagggagacgaggcggccaagaaacgt
ctggcagaggccaacttaagattggttgtcagcatcgcgaaacgttatgtagggcgcggt
atgctgtttctggatctgatccaggagggaaatctgggtcttatcaaagctgtggaaaag
tttgactacagaaaaggatataaattctccacatatgctacctggtggatccgccaggcc
atcacaagagccattgcagaccaggcacgtaccatccgtatccctgtgcatatggtggag
accatcaacaaactgatccgtgtgtcacgccagcttctgcaggaactgggcagagagccg
cagccggaggagattgcagagaagatggatatgtctgtggacagagtccgtgagatcctg
aagatctcccaggaacccgtatccctggagactcccatcggtgaggaggaagacagccat
ctgggagattttatccaggatgacaatgtgcctgtcccggcagacgccgctgccttcaca
cttttaaaagaacagctagtggaggttttaaacacgctgacagacagagagcagaaggtt
ctccgcctgcgcttcggcttggatgacggaagagccaggacactggaagaagtgggcaag
gagttcaatgtgaccagggagcgtatccgccagatcgaggcgaaagcactccgtaaactg
cgccaccccagccgcagccgcaaattaaaggattatctggattaa
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