Blautia parvula: LC508_07380
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Entry
LC508_07380 CDS
T09421
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
blar
Blautia parvula
Pathway
blar03410
Base excision repair
blar03430
Mismatch repair
blar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LC508_07380 (recJ)
03430 Mismatch repair
LC508_07380 (recJ)
03440 Homologous recombination
LC508_07380 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blar03400
]
LC508_07380 (recJ)
DNA repair and recombination proteins [BR:
blar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LC508_07380 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LC508_07380 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LC508_07380 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
GlutR_dimer
PIGA
Motif
Other DBs
NCBI-ProteinID:
UBU23180
LinkDB
All DBs
Position
complement(1559814..1561529)
Genome browser
AA seq
571 aa
AA seq
DB search
MEKWVISAKKADFYEISRKFGVDPVIARLIRNREQITDEEIDRYLHGKLTGLHSWKLLKG
MDTALDILIHKIREGKKIRIIGDYDIDGICSTYILLIGLRRAGACVDVDIPDRMKDGYGI
SKELIDLALAANTDTIVTCDNGISALEQIAYAKSLGMTVVVTDHHEIPYEEQEDGSVRTF
VPDADAIVNPKQQDCPYPYKGICGAMVAYKVICGLYERMEIPASETEELIEFAAIATVGD
VMDLQDENRIMVKEGLKRIMHTQNLGLKALIHVNNLDDRPLTAYHIGFVIGPCMNASGRL
STAKRALNLLLCRDREEAAALAADLKALNDSRKDMTAKGVEEAAEMVENTSLHEDRVLVI
YLPKCHESLAGIIAGRIRERYSKPVFVLTKAEEGVKGSGRSIETYHMFRELTKCRELLSK
FGGHPMAAGLSLPEENVEPFRQMLNENCTLTEEDMAQKVLIDVPMPISYVNMPLIRQLSL
LEPFGKGNTKPLFAQKNVRIENCRVFGKNRNVVKMKLFDENGCEAQGVWFGEGDAFVERI
KEKPRWSVAYYPSINAYNGRESIEIIVQNYI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatgggtgatttccgccaagaaagcggatttttatgagataagccggaagttc
ggcgtggacccggtcatagcaagactgatacggaacagggaacagataacagatgaggag
atcgacagatatctgcatggaaagcttacgggccttcactcctggaagctgttaaaggga
atggacacagctcttgacattctgatacataagatcagggaaggaaaaaagatcaggatc
atcggggattacgatattgacggcatctgttccacctatattctgctcattggccttcgc
cgcgcaggggcctgtgtggatgtggatattccggacaggatgaaagacggatacggcatc
agcaaagaactgatcgacctggctttggcggcaaatacagacaccattgtgacctgcgac
aacggcatcagcgccctggagcagatcgcttacgccaaaagcctcggcatgaccgtggtg
gtgacagaccatcatgagattccctatgaggagcaggaggacggcagtgtgaggaccttt
gtcccggacgcggatgccattgtaaatccaaaacagcaggactgcccttatccttacaag
gggatctgcggggccatggtagcctacaaggtcatctgcggcctttatgagcggatggaa
attcctgcttcagagacggaggaactcattgaatttgcagccatcgccaccgtgggggat
gtgatggacctgcaggatgagaacaggatcatggtaaaagaagggctgaaaagaatcatg
cacacgcagaatctgggattaaaagctttgattcatgtcaataatctggatgacaggcct
cttaccgcttaccatatcggctttgttatcggtccctgtatgaatgccagcgggcgcctg
agcacagccaaaagagcgctgaacctgcttctgtgccgtgaccgggaggaagcggcagct
ctggcggcggatttgaaagcactcaacgacagcagaaaggatatgacagcaaaaggtgtg
gaggaagcggcagagatggtggagaacacatctcttcatgaggacagggtacttgtcatc
taccttcccaagtgtcatgagagtctggcaggcattatcgccggccgtatccgggagcga
tacagcaaaccggtatttgtccttacaaaagcggaggagggggtcaagggctccggccgc
tccatagagacctaccacatgttcagggaacttacaaaatgcagggagctgctgtcaaag
ttcggcggacatcccatggcagcggggctttcccttcctgaggaaaatgtggagcctttc
cggcagatgctcaatgaaaattgtactcttacagaggaggacatggcacagaaggtgctg
attgacgtgcccatgcccatttcttatgtgaacatgcctctgatacgccagctttccctg
ctggagccgttcggcaagggaaacaccaagcctctgtttgcacagaaaaacgtccgcatt
gagaactgccgcgtcttcggaaagaacaggaatgtggtgaagatgaagctctttgacgag
aacggatgtgaggcacagggcgtgtggttcggagagggggatgcctttgtggagcggata
aaagagaagcccagatggtctgttgcatactatccatccataaatgcctataatggcagg
gaaagtattgaaattatcgttcaaaattacatttga
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