Blautia parvula: LC508_11985
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Entry
LC508_11985 CDS
T09421
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
blar
Blautia parvula
Pathway
blar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC508_11985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blar03019
]
LC508_11985
03009 Ribosome biogenesis [BR:
blar03009
]
LC508_11985
Enzymes [BR:
blar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LC508_11985
Messenger RNA biogenesis [BR:
blar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC508_11985
Ribosome biogenesis [BR:
blar03009
]
Prokaryotic type
rRNA helicases
LC508_11985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
AAA_30
RuvA_C
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
UBU24055
LinkDB
All DBs
Position
complement(2571046..2572491)
Genome browser
AA seq
481 aa
AA seq
DB search
MTDNFNQYPLSQEILEALEGLGYKTPTGIQQEVITPMLAGKNVVVKAPTGSGKTAAFAIP
ICEGVWWEENAPQALVLEPTRELAVQVSEEMFHIGRKKRLKVPAVFGGFPIDKQIQTLRQ
KSHIVTGTPGRIMDHLGRESLKLDKVKWLVIDEADLMLDMGFIDEVKNILSLVPENCRIS
LFSATLGPEIRELADAFIPDRILVLQEPTKEQTAAITEKVYFTDQERKYGDFLKVLINEN
PKSCMIFCGTREMTNVLFQKLRRGRIFCGMLHGEMEQRERLKTVDAFRRGCFRFLIATDV
AARGIDFEQITHVVNYDFPTGKETYVHRIGRTGRNGKCGTAISLVTEEDKRMLKQVEAFV
GQELPGAEIPETEEEKEKAFWKAQRVKAEAKPEKGAVLNRGITRLSIGGGRKSKMRAGDI
VGTICSIDGVEASDIGIVDIRDSLSYVEVLNFKGNQVIECLQTKPIKGKVRKVRKTKRPG
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaattttaaccaatacccgctttcacaggaaatcctggaagcattggaaggt
ttgggatataagacacctacaggcatacagcaggaagtcattacacccatgcttgcggga
aaaaatgtggtggtgaaagcaccgacgggcagcgggaagacagcggcatttgccataccg
atctgtgaaggtgtatggtgggaggagaatgcgccccaggcgctggtactggagcctacc
agggaactggcagtgcaggtcagcgaggaaatgtttcatataggaagaaagaaacgtttg
aaggtgccggcagttttcggagggtttcccattgataagcagattcagaccctgcggcag
aaatcccatattgtcacaggtacaccgggacgtattatggaccatctgggcagggagagc
ctgaagcttgacaaagtaaaatggctggtgatagatgaggcggatctgatgctggatatg
ggctttatcgacgaagtgaaaaatatcctttctctggttccggaaaactgcagaatatcc
ctgttctccgccacattagggccggagatcagggagctggcggatgcgtttattccggac
agaatacttgtgctgcaggaacccacgaaggagcagacagcggcgatcacggaaaaggtc
tatttcactgatcaggagagaaaatacggggactttctcaaggttcttataaatgagaat
ccaaagagctgtatgattttctgcgggacaagggagatgacaaatgttctgtttcagaag
ctgcgcagagggcgtatattctgcgggatgctgcatggggagatggagcagagggagagg
cttaagactgtggatgcgtttcggagaggctgctttcgctttctgatcgcaacggatgtg
gctgcaagggggattgattttgaacagatcacccatgttgtgaattatgattttccaacg
gggaaggaaacgtatgtccatcggatcggcagaaccggaagaaacggaaaatgcggtaca
gccataagcctggtaacagaagaggacaaaaggatgctgaagcaggtggaggcatttgtg
gggcaggagctgcccggcgcggaaattccggagacagaggaagaaaaggaaaaggcattc
tggaaagcccagcgcgtaaaagcagaagcgaaacctgaaaagggggcggtattgaaccgg
ggaattacacgtctgtccatcggcggaggccggaaatcaaaaatgcgggctggggatatt
gtgggaaccatctgcagtattgacggcgtggaggcctcagacataggcattgtggatatc
cgggacagtttaagctatgtggaggttttaaattttaaggggaatcaggttatagaatgt
cttcagacgaagccgatcaaggggaaagtccgtaaggtcagaaaaacaaagcggccgggg
gattag
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integrated database retrieval system
