Blautia parvula: LC508_13510
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Entry
LC508_13510 CDS
T09421
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
blar
Blautia parvula
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blar03032
]
LC508_13510 (topA)
03400 DNA repair and recombination proteins [BR:
blar03400
]
LC508_13510 (topA)
Enzymes [BR:
blar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LC508_13510 (topA)
DNA replication proteins [BR:
blar03032
]
Prokaryotic type
DNA Topoisomerases
LC508_13510 (topA)
DNA repair and recombination proteins [BR:
blar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LC508_13510 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
RelA_AH_RIS
DUF7340
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
UBU24350
LinkDB
All DBs
Position
complement(2896578..2898668)
Genome browser
AA seq
696 aa
AA seq
DB search
MAKYLVIVESPAKVKTIKKFLGSNYEVMASNGHVRDLPKSQLGIDVENDYEPKYITIRGK
GDILAGLRKAAKKADKVYLATDPDREGEAISWHLSKALKLDEKKMRRITFNEITKTAVKA
SIKEARDIDMNLVDAQQTRRMLDRMVGYRISPVLWAKVKRGLSAGRVQSVALRIIGDRED
EINAFIPEEYWTLDAEFAVKGEKKPLIAKFYGNKNKKMSIGSREELDKILAGLEGASYEV
AEVKKSERTKKPPLPFTTSTLQQEASKVLNFSTQKTMRLAQQLYEGIDIKGNGTVGVITY
LRTDSTRISEEAESAAHEYITSQYGPEYTLTQEKKDDKKKKIQDAHEAIRPTDISRTPAS
LKESLSRDQFRLYQLIWKRFTASRMQNAKYETTSVKIKGGEYYFTMAASKLKFDGFMAVY
VQEDEEKTENSFLAKGLDESTELSFQGFHEQQHFTQPPAHYTEATLVKALEELGIGRPST
YAPTITTIIARRYVAKENKNLYMTELGEVVNNIMKKSFPSIVDVYFTATMEELLDSVGEG
LVQWKTVIRNFYPDLEDAVQTAEKELEEVKIEDEVTDVICDLCGRNMVIKYGPHGKFLAC
PGFPDCRNTKPYLEKIGVPCPVCGKDVVLRRSKKGRRYYGCENNPECEFMSWQKPSKEKC
PNCGGYMLEKGNKIVCADEHCGFVMIRKKDEVEQEA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatatttagtgattgtggaatcaccggcaaaagtgaagacaatcaagaaattt
ctcggttcaaattatgaggtcatggcgtccaacggacatgtaagggatcttcccaaaagc
cagcttggaatcgacgtggagaatgattacgaacctaaatatataactatcaggggaaag
ggggatatcctggcggggcttcgcaaggccgcgaaaaaagcggacaaggtatatcttgca
actgaccccgaccgtgaaggagaagccatttcctggcacctgtccaaagcgctgaaactg
gacgagaagaagatgcgcagaattacattcaatgagatcacgaaaactgcagtgaaagct
tctattaaagaggcgcgcgacattgacatgaatctggtggatgcgcagcagaccagaaga
atgctggaccgcatggttggttacaggatcagtccggtactctgggctaaggtgaaaaga
gggctcagtgcgggccgtgtacagtcagtggccctgcgcatcatcggggaccgtgaggat
gagatcaatgcatttatccctgaggaatactggacactggatgcggaatttgctgtcaaa
ggcgaaaagaagccgctgattgccaagttctatggaaataaaaacaaaaaaatgagcatc
ggctcaagggaagaactggataagatccttgccgggctggagggcgccagctatgaagtg
gctgaggtgaagaagagcgagagaacgaaaaagccgccgcttccgtttactaccagtacc
ttacagcaggaagcatcgaaagtgctgaatttttccacacagaagaccatgcgtctggcg
cagcagctctatgagggaattgatattaaagggaacggcacagtgggtgttatcacctat
ctgcgtacagactccaccaggatttctgaggaggctgaatctgccgctcatgaatacatc
acttcccagtatgggccggaatacactctgacccaggagaaaaaggatgataagaagaaa
aagatacaggatgcccatgaagccatccgtccaacagatatttcaaggacacctgcttct
ctgaaggaatctctgagcagagatcagttcaggctgtatcagctcatctggaaacgcttt
actgccagcaggatgcagaatgcaaaatatgagactacatccgtgaaaatcaagggcgga
gagtattattttaccatggctgcctctaagctgaaattcgacggctttatggctgtctat
gtgcaggaggatgaggagaagacagagaattctttccttgcaaaaggactggacgagagc
acagagctttccttccagggattccatgagcagcagcattttacacagccgccggcacat
tatacggaggctacactggtaaaggcgctggaggaactgggaatcggacgtccaagtacc
tatgcccctacgatcaccacgatcattgcaaggcggtatgtggcgaaggagaataagaat
ctgtatatgacggagctgggcgaagtcgttaataatattatgaagaagtcattccccagt
attgtggatgtgtattttacggccacaatggaggaactgctggacagtgtgggggaagga
cttgtgcagtggaagactgtgatacggaatttctatccggatctggaggatgcagtgcag
actgcggagaaagagctggaggaagtgaagatcgaggatgaggtgacagatgttatctgc
gatctgtgcgggcggaatatggtgatcaaatatggaccgcacgggaagttcctggcttgt
ccgggatttccggactgcaggaatacgaagccttatcttgaaaaaatcggtgttccctgt
cctgtctgcgggaaagatgtggtgctgcgcaggagtaagaaggggcgccggtattatgga
tgtgagaataatccggaatgcgagtttatgtcatggcagaagccttctaaggagaaatgc
ccgaattgcggtgggtatatgctggagaaggggaataagattgtttgtgcggatgagcat
tgtgggtttgtgatgatacggaagaaggatgaggtggagcaggaggcctga
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