Blautia parvula: LC508_13995
Help
Entry
LC508_13995 CDS
T09421
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
blar
Blautia parvula
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blar03009
]
LC508_13995 (rlmD)
Enzymes [BR:
blar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LC508_13995 (rlmD)
Ribosome biogenesis [BR:
blar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC508_13995 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
MTS
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
N6_N4_Mtase
PrmA
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UBU24443
LinkDB
All DBs
Position
complement(3011842..3013005)
Genome browser
AA seq
387 aa
AA seq
DB search
MENKLESKKCPVVKKCGGCGCRGISYKEETDIKEKKVRKLLKGICKVEPIIGMENPYHYR
NKIHASFARLRDGSIVSGKYAEGTHRVVPVDDCLIEDEKADAIVRDIRGLLKSFKIKIYN
EDSGFGLLRHVMVRRGFRSGEIMVVLVLASPIFPSKNNFVKALRKLHPEITTVILNVNDK
RTSMVLGERNITIYGKGYIEDELCGCIFRISPSSFYQVNPVQTEKLYGKAVEFAGLTGKE
RVIDAYCGIGTIGLIASKHAKEVIGVELNKDAVRDAGINAKRNGSKNFRAFQGDAGAFMV
QMAEAGEQADVVFMDPPRAGSDEAFLSSVVKLGPKKVVYISCNPETLARDLRYLVKKGYE
AVRAVPYDMFAWTEHVETVCLLTPKAY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaactggaatcaaaaaaatgtcctgtggtaaaaaaatgcggagggtgcggc
tgcagaggcatttcctataaagaagagactgatatcaaggaaaagaaggtgaggaagctt
ttaaagggaatctgtaaagtagagccgatcataggtatggagaatccctatcattacagg
aacaagatacatgcctcctttgcccgcctccgggacggcagtatagtttccggaaagtat
gcggaggggacgcacagagtggtgcctgtggatgactgcctgattgaggatgaaaaggca
gatgccattgtgagagatatcaggggacttttaaaatcttttaagatcaagatttataat
gaggacagcggattcgggcttctgcggcatgttatggtgcgcaggggattcagaagcggg
gagatcatggtggttctggtattggcttctcctattttcccatcaaagaataattttgta
aaggcccttagaaagctccatcccgagatcacgaccgtgatcctcaatgtaaatgacaag
aggaccagcatggtgcttggggagcggaatatcaccatttacgggaagggctatattgag
gacgagctgtgcggatgtattttccgcatttctccttcctccttttaccaggtaaacccc
gtgcagacggaaaaattatatggaaaagccgtggaatttgccgggcttacagggaaagag
cgcgtgatcgacgcatactgcggcatcggaaccattggcctcattgcgtcgaaacacgca
aaagaagtgatcggcgtggagttaaataaggacgcagtgcgcgacgcgggcatcaatgca
aagagaaacggcagcaaaaatttccgggcatttcagggggacgccggcgcattcatggtg
cagatggccgaagcgggagaacaggcagatgtagttttcatggaccctccaagggcaggc
agtgatgaggctttcctctcatccgtcgtgaagctgggaccgaaaaaggtagtatacatt
tcctgcaatccggagacgctggcaagggacctgagatatttggttaagaaagggtatgaa
gcggtgagggcggtaccgtatgatatgtttgcttggacggagcatgtggaaactgtttgc
cttctcacgccaaaagcttattaa
DBGET
integrated database retrieval system
