Blautia parvula: LC508_16855
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Entry
LC508_16855 CDS
T09421
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
blar
Blautia parvula
Pathway
blar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC508_16855 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blar03021
]
LC508_16855 (rpoC)
03400 DNA repair and recombination proteins [BR:
blar03400
]
LC508_16855 (rpoC)
Enzymes [BR:
blar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC508_16855 (rpoC)
Transcription machinery [BR:
blar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LC508_16855 (rpoC)
DNA repair and recombination proteins [BR:
blar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LC508_16855 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UBU19668
LinkDB
All DBs
Position
complement(3663399..3667112)
Genome browser
AA seq
1237 aa
AA seq
DB search
MPETANKEAYQPMTFDAIKIGLASPEKIRDWSRGEVKKPETINYRTLKPEKDGLFCERIF
GPSKDWECHCGKYKKIRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDLSPRSLEKVLYFANYIVLDAGTTELQYKQVLTEKEFQDAREKYGDGAFRVGMG
AESIMELLEAIDLERESKELKAGLKDSTGQKRARIVKRLEVVEAFRESGNRPEWMIMTVV
PVIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEA
VDALIDNGRRGRPVTGPGNRALKSLSDMLKGKSGRFRQNLLGKRVDYSGRSVIVVGPELK
IFQCGLPKEMAIELFKPFVMKELVSNGTAHNIKNAKKMVEKLEPEVWDVLEDVIKEHPVM
LNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRF
LLLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGVKGEGKYFKSVNEAILAYENGYI
TLQTRIHVLCSKTQPDGTVLEDIVDSTLGRFLFNEIIPQDLGFVDRSVPGNELKLEVDFL
VGKKQLKQILEKVINTHGATRTAEVLDKIKATGYKYSTRAAMTVSISDMTVPPQKPEMIQ
KAQDTVDLITKNFKRGLITEEERYKEVVETWKKTDDELTKALLTGLDKYNNIFMMADSGA
RGSDKQIKQLAGMRGLMADTTGHTIELPIKSNFREGLDVLEYFMSAHGARKGLSDTALRT
ADSGYLTRRLVDVSQDLIVRQVDCCEDKGEIPGMWVKAFMDGREEIESLQERITGRFSCE
TIKNAKGEVIVKANHMITPKRAARVVKEGVKENGKPYDSVKIRTILTCKCHIGVCAKCYG
ANMATGEPVQVGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARK
PKGLAIITEIKGVATLKDTKKKREIIVTDNEDGNSKTYLIPYGSRIKVQDGQYLEAGDEL
TEGSVNPHDILKIKGVRAVQDYMIQEVQRVYRLQGVEINDKHIEVIVRQMLKKIRIEDNG
DTEFLPGTLVDVLDYEEENERLIKEGKEPADGKQVMLGITKASLATNSFLSAASFQETTK
VLTEAAIKGKIDPLIGLKENVIIGKLIPAGTGMKCYSNIKLDTDLAEDEEEYEDELELAE
ALEELPAEDEEEAVQLTDEVDEVELSEEEEEAELTEE
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaacagcaaataaagaggcatatcagccaatgacctttgatgccatcaaaatc
ggattggcgtccccggagaaaatccgggactggtccagaggcgaggttaaaaaaccggaa
accattaactatagaaccctgaaaccggaaaaagacggcctgttctgcgagaggattttc
ggaccgagcaaggactgggaatgtcactgcggtaaatacaagaagatccgttataaaggc
gttgtctgcgaccgatgcggcgttgaagtaacaaaagccagtgtccgcagggagcgtatg
ggccatattgaactggcagcaccggtctcccacatctggtacttcaagggtatcccgtcc
agaatgggactgatcctggatctttccccaaggtccctggagaaagttctgtactttgcc
aactatattgttctggatgcaggcaccacggagctgcagtacaaacaggtactgacagag
aaagagttccaggatgccagagaaaaatacggcgacggtgcgttccgcgtaggaatgggc
gcggagtccattatggaactgctggaagccattgacctggaaagagaatccaaggagctg
aaagccggcctcaaggattccacaggacagaagcgtgctcgtattgtaaaacgtcttgag
gttgtggaagccttccgtgaatccggaaaccgtccggagtggatgatcatgacagtggta
cctgtcattccgccggaccttcgtcctatggttcagttagacggcggacgtttcgcaaca
tctgacttaaatgatttatatagaaggatcatcaacagaaataaccgtctgaagagactg
cttgaactgggcgctcctgatatcattgtccgcaatgaaaagagaatgcttcaggaagct
gtcgatgccctgatcgacaacggacgccgcggccgtccggtcacaggaccgggtaaccgt
gcactgaaatccctttccgatatgctgaaaggtaaatcaggacgtttccgtcagaacctt
ctgggtaaacgagttgactactcaggccgttccgttattgtagttggacctgaactgaag
atcttccagtgcggtctgccgaaagagatggcaattgagctgttcaagcccttcgttatg
aaagagctggtaagcaacggtactgctcataacattaagaatgccaagaagatggtggag
aagctggaaccggaagtatgggatgtactggaagatgtcatcaaagagcatccggtcatg
ttaaaccgtgctcctaccctgcatcgtctgggtatccaggcatttgagcctattctggtt
gagggtaaagcaatcaagctgcatccccttgtatgtaccgcgttcaacgccgacttcgat
ggtgaccagatggcggttcatcttcctctgtccgttgaggcgcaggcagagtgccgtttc
ctgcttctgtctccgaacaacctgctgaaaccgtctgacggtggtccggtggctgttcct
tcacaggatatggttctcggtatctactatctgacacaggagagaccgggcgttaagggt
gaaggcaagtatttcaagagtgtaaacgaagccattctggcttatgagaacggatatatc
acactgcagaccagaatccatgtactctgcagcaagactcagccggatggcacagtattg
gaagacattgtggattccacactgggacgtttcctgttcaatgagatcattccgcaggat
ttaggttttgtggaccgttccgttccgggcaatgagctgaagctggaggttgacttcctg
gtaggcaagaaacagctcaaacagattctggagaaagtaatcaatacccatggcgctacc
agaaccgcagaggtgctggataagatcaaagccacaggatacaaatactcaaccagagct
gccatgaccgtatctatctccgacatgactgtgccgcctcagaaacctgagatgatccag
aaggcacaggatacggttgaccttatcaccaagaacttcaaacgtggtcttatcacggaa
gaagagagatataaagaagtcgttgagacatggaagaagactgacgatgagcttaccaaa
gccctgctgacaggacttgataagtacaacaacatcttcatgatggctgactccggtgcc
cgtggttctgataagcagatcaaacagcttgccggtatgcgtggtctgatggccgataca
acaggtcacaccatcgagctgcccatcaagtccaatttccgtgaaggtctggacgtactg
gaatacttcatgtccgcccatggtgctcgtaaaggtctgtccgatacagctctgcgtacc
gctgactccggttacctgacaagacgtctggttgacgtttcccaggatctgatcgtccgt
caggtggactgctgtgaagacaaaggcgagattccgggtatgtgggtgaaagccttcatg
gacggaagggaagagattgaaagccttcaggagcgtattacaggacgtttctcctgcgag
accatcaagaacgccaaaggcgaagtgatcgtcaaagcaaaccatatgattactccgaaa
cgtgccgcacgtgtggtaaaagaaggggtaaaagagaatgggaaaccatatgattccgtt
aagatccgtacgatcctcacatgtaaatgccacatcggtgtctgcgccaagtgttatggt
gccaacatggcaaccggtgagccggtacaggtgggtgagtccgtaggtatcattgcagcc
cagtctatcggtgaaccaggtacacagcttaccatgcgtaccttccataccggtggtgtt
gccggcggcgatatcacacagggtcttccccgtgtggaggagctttttgaggcaaggaag
ccgaaaggtcttgccatcatcacagagatcaaaggtgtcgccacactgaaggatacaaag
aagaaacgtgagatcatcgtcacagacaatgaggacggcaactccaagacttacctgatc
ccttacggttcccgtatcaaggttcaggacggacagtatctggaggccggtgatgagctg
acagaaggtagtgtcaatcctcatgacattctgaagattaagggcgtccgcgctgttcag
gattatatgatccaggaagtacagcgtgtataccgtctgcagggtgttgagatcaacgat
aagcatattgaagttattgtccgccagatgctgaagaagatccgcatcgaggacaacgga
gatacagaattcctgccgggaaccctggttgacgttctggactatgaggaagagaacgag
agactgatcaaagagggcaaagagccggcagatggaaaacaggttatgcttggtatcacc
aaggcatccctggcgaccaactccttcctgtccgcagcttccttccaggagaccacaaag
gttctgacagaagctgccatcaagggcaagatcgacccgctgatcggtctgaaggagaac
gtaatcatcggtaaactgattcctgcaggaacaggcatgaagtgctactccaacattaag
ctggatacagatctggctgaggatgaagaggagtacgaggatgaacttgaacttgctgaa
gccctggaagaacttccggcggaggatgaagaggaagctgttcagctgacagatgaggtt
gatgaggtggaactttccgaggaggaagaggaagccgaactgacagaagaataa
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