Blautia parvula: LC508_17385
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Entry
LC508_17385 CDS
T09421
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
blar
Blautia parvula
Pathway
blar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC508_17385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blar03400
]
LC508_17385
Enzymes [BR:
blar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LC508_17385
DNA repair and recombination proteins [BR:
blar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC508_17385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
HHH_5
UvrD_C_2
AAA_11
OB_YrrC
Viral_helicase1
DNA_pol_lambd_f
UvrD-helicase
AAA_22
HHH
PIF1
nSTAND3
DEAD
CBM_5_12
SLFN-g3_helicase
NPHP3_N
ABC_ATPase
AAA
Motif
Other DBs
NCBI-ProteinID:
UBU19771
LinkDB
All DBs
Position
complement(3789556..3791727)
Genome browser
AA seq
723 aa
AA seq
DB search
MLCEFDRLIYPQSITAVDASSYMIALYNPCEKIKDSTGNTVTQVKAVGYCLPISSNLRYD
MFGHWSKNPKFGIQFEVESYNEVIIPTKEGIIAYLSSGQIKGIGPKIAEKIYAAFGQQSL
EILDKEPERLLAIPGISEIKLKKIYDSYLVNRGARDVVAFLSPHGITPNRAVRLYKEYGE
KTMDIVKNHPYQLCDMAGIGFKTADHIAMSMGFDRLSTERVDEGLLYTLEDAEAKGHLCM
EKHEFVKACLKILDTPALTAEMVANRAARLVFGGQLVSYQGNVYRAKTAHVEEQLASAIH
QQMKYRKMHSYGDLDAAIDAEEQKLKMKFALEQREAVKMALTQGLSIITGGPGTGKTLIQ
RAILDIYQKNNPKSEICCCAPTGRAARRMEQATGVSASTVHKALGLMADEDGDYDGPEAL
TADLIVVDEISMLDVYLAEYLFDAVKYGAQMVLIGDADQLPSVGPGAVLSEMIASGCIPV
VRLDKVFRQNAGSRIATNAKLIRHGNVGLEYGNDFQFINSPRLSDSAELIVDLYLQETKE
YGVDNVALLTPYRQKTETGVNALNECLREKVNPPDTQKPEVVFGNRKFRCGDKVMQIKNH
DDVNNGDIGYVRKIIRIGDDTTVHVDFGDGRMKEYDSSELDMLDLGYASTIHKSQGAEYQ
SVIINLQCAHSIMLTRPLIYTAITRGKERVTIVGEKRALCISIKRTDTEKRGTCLAKRLQ
ALA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgctatgtgaatttgataggctcatatatccacaaagtattacggctgttgatgccagc
agttatatgattgcgctctacaacccatgcgaaaagatcaaagatagcacagggaacacg
gttacacaggtgaaggcagtgggatattgcttacctatatcgagcaacctgcgctacgac
atgtttgggcattggagtaaaaatcccaaatttggcatccagtttgaagtggagagttat
aacgaagtgataataccgacgaaggaaggcattattgcctatctttcttccgggcagatt
aaagggattggtccaaaaatagcggagaaaatttacgcagcttttggtcagcagtcactg
gagatactggataaagaaccggaaaggctccttgccataccgggtatcagtgagataaaa
ctgaaaaaaatctatgattcctatctggtcaatcgtggcgcccgggatgtggtggcgttt
ctgtcaccacatggcattacgccgaaccgagcggtacgcctgtataaggagtatggggaa
aagacgatggatattgtaaaaaatcatccctatcagctctgcgacatggccgggattggt
ttcaagacggcagaccatatcgctatgagcatggggtttgaccggctatcgacagagcgt
gtggatgaaggactcttgtatacgctggaggatgcggaagccaaaggtcatctctgcatg
gagaaacatgagtttgtgaaagcctgcctaaaaattctggatacgcctgcgttaacagca
gaaatggtggcgaaccgtgccgccaggctggttttcggcggacagttggtgtcgtaccag
ggcaatgtgtatagggcaaagaccgcacatgtggaagaacagcttgcctccgccattcat
cagcaaatgaagtaccggaagatgcacagctatggggatttggatgctgccatagatgca
gaggagcagaagctgaaaatgaagtttgcactggagcagcgcgaagcggtaaagatggct
ctgacgcaggggctttccattatcactggtggacctggaacaggaaagactttgatacaa
cgtgccattttagatatttatcaaaaaaacaatcccaaaagtgaaatctgctgttgtgcc
cctacgggtagggcagcaaggaggatggagcaggcaactggtgtttcggcttcaactgtt
cataaagcccttgggctgatggcggatgaggacggagactatgatggacccgaagcgctt
actgcagatctgattgtggtagatgagatttccatgctggatgtttatctggctgaatat
ctgtttgatgcagtgaaatatggcgcccagatggtgctgattggcgatgcagatcagctg
ccttcagtgggacctggcgcagtgctcagtgagatgattgccagcggatgtatcccagtt
gtacggttggacaaggtatttcgccagaatgcgggaagccgcattgcgacaaatgcgaag
ctgatccgccatgggaatgtgggcctggagtatgggaatgactttcagtttatcaattct
cccaggctttctgattctgctgaactcattgtcgatctttatctgcaggaaacgaaagaa
tacggggtcgataatgtggcgctgcttacgccataccggcagaagacggaaaccggagtc
aatgcactgaatgagtgtttgcgtgagaaggtgaaccctccggatacgcagaaaccggaa
gttgttttcggaaaccggaaatttcggtgtggggacaaggtcatgcagatcaaaaaccat
gatgatgtcaataacggtgatatcgggtatgtcagaaaaattattcgcattggcgatgac
actacggttcatgtggactttggtgacgggcgcatgaaagagtacgattccagtgaattg
gatatgttggatttaggttatgcctctactatccataaatcacagggagcggagtaccag
tccgtcatcatcaatctgcaatgcgcccattccatcatgctgacgaggcctcttatctat
acggcaattacacgaggaaaagagcgtgtaaccattgtcggggaaaaaagggcgctttgt
atttccattaaaagaactgacacagaaaaacgcggcacctgccttgctaagcggctgcag
gcgcttgcttga
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