Blautia parvula: LC508_20245
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Entry
LC508_20245 CDS
T09421
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blar
Blautia parvula
Pathway
blar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC508_20245 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blar03019
]
LC508_20245 (recQ)
03400 DNA repair and recombination proteins [BR:
blar03400
]
LC508_20245 (recQ)
Enzymes [BR:
blar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC508_20245 (recQ)
Messenger RNA biogenesis [BR:
blar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LC508_20245 (recQ)
DNA repair and recombination proteins [BR:
blar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LC508_20245 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UBU20285
LinkDB
All DBs
Position
4370910..4373228
Genome browser
AA seq
772 aa
AA seq
DB search
MDKYQILKKYFGYDTFREGQEPLIDSILSGRDVLGILPTGAGKSLIYQIPAMLMDGITLV
ISPLISLMKDQVGSLNQAGIHAAFLNSSLTTGQYYKALELARQGRYPIIYVAPERLVTEE
FLDFALHAKIAMVAVDEAHCVSQWGQDFRPSYLKIVEFIKKLPKRPVVSAFTATATREVR
DDIMDILLLENPEVLTTGFDRPNLYFGVQSPKDKYGVLKNYLEMHPGECGIVYCLTRKGV
EEVCGKLKEDGFSVTRYHAGLGDAERKKNQDDFIYDRYQIIVATNAFGMGIDKSNVRFVV
HYNMPKNMESYYQEAGRAGRDGEPAECILLYGGQDVVTNQLFIDNSQENQELDPVARELV
AERDRERLRKMTYYCFTNECLRDYILRYFGEYGENYCGNCSNCLSQFESVDVTEIARALV
GCVKSSRQRYGVNVIIDTVHGANTAKIRNYRMNENPNYGELAKVPSYKLRQVINYLLLNE
FLTVTNDEYAIVKLTAKSEEVLGDEAQITMKMAKEQEHQAKEKKEKKSRKGIAAGLAGAD
FTEADEQLFEVLRSLRMEIAREEKVPPYIVFSDKTLTHMCIVKPRTRSAMLTVTGVGEFK
YEKYGERFVACIREHVPDDGENEDVTGAGIVGEEAGIFIENGMNDEGKGTGKNKGKAKGK
QEFSLTKDMEQAFPFADKMTLSELVAKLNELRDESTMKRLTNKAVQQKLLDEGYLETFGF
RGIPMQRASEKGKETGITAERRVSEKGNEYDVLYYSAEAQKTLLEMIKNGLK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatcagatactgaaaaaatattttggttacgatacatttcgggaggggcag
gagccgttgatcgacagtattttgtccggaagggacgtacttgggatattgccgacaggt
gccggaaaatcactcatatatcagatcccggctatgcttatggatggcattacgttggtg
atctcgcctctgatctctttaatgaaggaccaggtggggtctctgaatcaggcggggatt
catgcggcctttctgaatagttcactgacaactggccagtattataaggcacttgagctt
gccaggcaggggagatatcccattatttatgtggcaccggagaggctggtgacagaggaa
tttctggattttgcccttcatgcaaagatagctatggtggctgttgatgaggcgcactgc
gtttcccagtgggggcaggattttcgaccaagttatctgaagatcgtagagtttattaag
aaactgcccaaaaggccggtggtgagtgcctttactgctacagccaccagggaggtgcgg
gatgatattatggatattctgctgctggaaaatccggaggttctgaccacgggatttgac
aggccaaacctgtattttggagtgcagtctccgaaggataagtatggagtgctgaaaaat
tatctggagatgcatccgggagaatgcggcattgtgtactgtctcaccagaaaaggggtg
gaggaggtgtgcgggaaacttaaggaagatggattttccgttacacggtaccatgcaggc
cttggggacgcggagagaaagaagaaccaggacgattttatatatgacaggtatcagatc
attgtggcgacaaacgcgtttggtatgggaattgacaagtccaacgtgagatttgtagtg
cattacaatatgccgaagaacatggagagctattatcaggaggcaggacgtgccgggcgt
gacggggagccggcggaatgcattttactctatgggggacaggatgttgtgacaaaccag
ctctttattgacaacagccaggagaaccaggagctggacccggtggcccgggagctggtg
gcagagcgggacagggagaggcttcgtaaaatgacatattattgttttaccaatgagtgt
ctccgggattacatactgcggtattttggggagtatggggaaaattactgtgggaactgc
tccaattgtctgagccagtttgagtccgtggatgtgacggagattgccagagcgcttgtt
ggatgtgtgaaaagcagcaggcagagatatggggtaaacgttattattgacactgtacac
ggtgcgaatacggcaaaaatcaggaattacaggatgaatgaaaatcccaattacggggaa
ctggcaaaagtgccgtcatataaattgagacaggttataaattatctgctgctgaatgag
ttcctcacggttaccaatgatgagtatgcgatcgtgaagctgacggcaaaatcggaagag
gttctgggtgatgaggcgcagatcactatgaaaatggcaaaggaacaggagcatcaggca
aaggagaagaaggagaaaaagagcagaaaaggaattgcagccgggcttgccggagctgat
tttaccgaggcagacgaacagctcttcgaggtgctgcgcagtcttaggatggagatagca
agggaggagaaggtgccgccttatattgtcttctctgacaaaacattgacgcatatgtgt
attgtaaaaccaagaaccaggagtgcaatgctgacggttaccggcgttggagaatttaaa
tatgaaaagtacggggagcgttttgtggcatgtatcagggagcatgtgccggatgacggc
gaaaatgaagatgtgacaggggcaggaattgttggagaggaagcgggaatctttatagaa
aatggtatgaatgatgaggggaaaggtactgggaaaaataaggggaaggcaaaaggaaaa
caggaattttctctgacaaaagatatggagcaggcgtttccgtttgccgataagatgaca
ctcagcgagctggttgctaagttgaatgaactgcgtgatgaaagcaccatgaagcgtctg
acaaataaggcagtgcagcagaagctgctggatgaaggatatctggagacatttggattc
cgggggattcccatgcagcgtgcttctgagaaaggaaaagaaaccgggatcactgccgag
agacgtgtaagtgaaaagggaaatgaatatgatgtgctgtattattctgcggaggcacag
aaaacattgctggagatgataaagaatgggttaaagtaa
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