Blautia parvula: LC508_27505
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Entry
LC508_27505 CDS
T09421
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
blar
Blautia parvula
Brite
KEGG Orthology (KO) [BR:
blar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blar03016
]
LC508_27505
Enzymes [BR:
blar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LC508_27505
Transfer RNA biogenesis [BR:
blar03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LC508_27505
Prokaryotic type
tRNA splicing ligases
LC508_27505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UBU21659
LinkDB
All DBs
Position
6082327..6083442
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AA seq
371 aa
AA seq
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MKTVSGVYTSAKIFTDTIEDYALAQIQMLCDNEAFKECRVRVMPDVHPGKAGTIGFTSTI
AKRVLPSVVGIDMGCGITIARLKQKKVEFQRLDKVIRENVPAGFHIRKKLHRFHEMLTLG
ELRCRHHVNEKKAVHSLGTLGGGNHFIELDKDEEDGLYVIIHSGSRHLGQEITEHYLRTG
QEQLKERGLQVPYELTWLEDTLMEEYIGDLSVAVQFAELNRAAILDELVKGMKWKVLETW
SSVHNYIDISGGERILRKGAVSAKSGEKVVIPVNMRDGILLGTGLGNADWNDSAPHGAGR
IMKREDVKQRFTVSQFKSEMKGIYCTCIDKGTLDEAPFAYRGMDEITERVTDTVRIEKLI
RPLYCYKAGSE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtaagcggagtctatacttctgcaaaaatattcacagatacaatagaagac
tatgctctggcgcagatacagatgctttgtgacaatgaagcgttcaaagaatgccgggtc
agggttatgccggatgtacatccgggaaaagcagggaccattggttttacatctaccata
gcaaaaagggtgctccccagtgttgttgggatcgatatgggatgcggtatcaccattgcc
aggctgaaacaaaaaaaggtggaattccaaagactggataaggtcatccgggagaatgtc
cctgcaggattccatatcaggaaaaagcttcatagattccacgagatgctcacactcggg
gaattgagatgcaggcatcatgtaaatgaaaagaaagcggtccatagtctgggaaccctg
ggcggcggaaaccatttcatagagcttgacaaagacgaagaggacggtctctacgttatc
atccattccggcagccggcacctggggcaggagatcacagagcactatctgaggacggga
caggaacaattgaaagaaagagggctgcaggttccgtatgagctgacatggctggaagac
acccttatggaggaatatatcggtgatttgtcagttgcagtacagtttgcagagcttaac
cgggcggcgatcctggatgaactggtcaaaggaatgaaatggaaagtgctggaaacatgg
tcatccgttcataactatattgacatatccggcggggaaaggatcttgagaaaaggtgca
gtatccgcaaagagtggagagaaagtcgtgatccctgtcaatatgcgggatgggatcctt
ttgggaacaggactggggaatgcagactggaatgactccgcaccgcatggtgcagggcgc
attatgaagagggaagatgtaaagcagcgtttcacagtctcacagtttaaatccgaaatg
aaaggtatttactgtacctgcatagataaagggacgcttgacgaagcgccatttgcttac
aggggaatggatgagatcacggaacgagtcacagacacggtacggatagagaaactgatc
cggccattgtactgctataaagcaggcagtgaatga
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