Blastomonas sp. RAC04: BSY18_122
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Entry
BSY18_122 CDS
T04450
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
blas
Blastomonas sp. RAC04
Pathway
blas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY18_122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blas03019
]
BSY18_122
03009 Ribosome biogenesis [BR:
blas03009
]
BSY18_122
Enzymes [BR:
blas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BSY18_122
Messenger RNA biogenesis [BR:
blas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BSY18_122
Ribosome biogenesis [BR:
blas03009
]
Prokaryotic type
rRNA processing factors
BSY18_122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
RESC5
Motif
Other DBs
NCBI-ProteinID:
AOG00683
LinkDB
All DBs
Position
complement(121839..124763)
Genome browser
AA seq
974 aa
AA seq
DB search
MTTRMLIDARHQEETRVAVLKGNRIEEFDFESAEHKQIKGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPREDKIALLAEEARHAKEEADALAAEEEADDAAGHGEDT
DYNDGLSDDGLIEADDEPIVAETLSGDSDGESEGDGESDSEGENAEDARESDGEGNGNGR
NSGRRKRRDGRGGKAKASDEARTNRMALRRRYKIQDVIQRRQVMLVQVVKEERGNKGAAL
TTYLSLAGRYCVLMPNSAHGGGISRKISNASDRKRLKTIIAEMKLPTTMGCIVRTAGLSR
TKPEIKRDFDYLARLWDEIREKTLKASAPEIIHSDSDLIKRAIRDIYNRDIEEVLVEGEA
GYRAAKDFMKLLMPSHARRVKSYADPVPMFQRYGAEDQLSAMYEPVVQLKSGGYLVINPT
EALVSIDINSGRSTKEHGIEQTALSTNLEAAREIARQLRLRDMAGLVVIDFIDMEYGNNV
RKVEKAMRDALKSDRARIQVGRISGFGLMEMSRQRLRTGVLEASTRTCPHCDGTGLVRTA
SSAGLSALRLLEEEAARGHGSLITLRTSQEASIYVLNNKRRDLAEIEERFGVRIEILPNG
ENEGAKMEVTASGPRPEKTVTFQPIIDDDDDEEIEDDIDEIEEEEEAAPRRGRGDRGNRG
NRGDRGDRSERGERADRPERADRPERADGEERTERAPSQRTAEEGEGGRSKRRRRRRGKR
GKRDGDTALDENGQPVQTEASYDNGNEADFASEAGAEATGETDDQREDTGTDEATTATDD
GGEAKPRRARRGRRGGRARKGGEGDTGGDASDEASSDAEAGGASADEAAPMIEASPANAD
VAIADAAPETEDAAEAPAEKPKPKRKSRAKKPAAEAEAATEVAAEPEAAAASETDAEAAP
EAEAKPKPKRAPRKKAAPKAEAPSEAVTDTAPAAKAADDADAQPVAQAAPAAGQPAADSN
EPTRRGWWQRTFGN
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcgcatgttgatcgatgcgcgccaccaggaagaaacccgggtggcggtgctc
aagggaaaccggattgaggaattcgatttcgaatctgccgaacacaagcagatcaagggc
aatatctaccttgccaaggtaacacgggtcgaaccttcgctgcaggcagcgtttgtcgat
tatggcggcaaccgccacggcttcctcgccttttcggaaatccatcccgactactaccag
attccacgcgaggacaagattgccctgctcgcggaagaagcccgtcacgccaaggaagaa
gccgacgcgcttgctgccgaggaagaggccgatgatgccgcgggtcatggcgaggacacc
gactacaatgacggcctgtccgacgacggcctgatcgaagccgatgacgagcccatcgtc
gccgaaaccctgtcgggtgacagcgatggcgagagcgaaggcgacggcgagtccgactcc
gaaggcgaaaacgccgaggacgcgcgcgagagcgatggcgaaggcaacggcaacggccgc
aattcgggtcgccgcaagcgtcgcgatggccgtggcggcaaggccaaggccagcgacgag
gcgcgcaccaaccgcatggcgctgcgtcgccgctacaagatccaggacgtcatccagcgt
cgccaggtgatgctggtgcaggtcgtcaaggaagaacgcggcaacaagggcgccgcgctc
accacctatctctcgctcgcaggccgctattgcgtgctcatgcccaacagcgcgcacggc
ggcggcatcagccgcaagatctcgaacgcgtcggaccgcaagcgtctgaagacaatcatc
gccgagatgaagctgcccaccacgatgggctgcatcgtgcgcaccgccggcctttcgcgc
accaagcccgagatcaagcgcgacttcgactatctcgcacgcctgtgggacgaaatccgc
gaaaagacgctgaaggcgtcggcgcccgagatcatccactcggacagcgatctgatcaag
cgcgcgatccgcgacatctacaaccgggatatcgaggaagtgctggtcgaaggcgaagcg
gggtaccgcgccgccaaggacttcatgaagctgctgatgcccagccatgcgcgccgggtg
aagagctatgccgacccggtgccgatgttccagcgttacggcgccgaggaccaattgtcg
gcgatgtacgaaccggtcgtccagctcaaatcgggcggctatctggtgatcaacccgacc
gaagcgctcgtttcgatcgacatcaactcgggccgttccaccaaggaacacggcatcgag
cagaccgcgctcagcaccaacctcgaggccgcgcgcgaaatcgcccgtcagttgcgcttg
cgcgacatggctggccttgtcgtcatcgatttcatcgacatggaatatggcaacaacgtc
cgcaaggtcgagaaggccatgcgcgatgcgctgaagagcgaccgtgcgcgcatccaggtc
gggcgcatctcgggcttcggcctgatggaaatgagccgccagcgcctgcgcaccggcgtg
ctcgaggcatcgacccgcacctgcccgcattgcgacggcaccggcctggtgcggaccgca
tcgtcggcgggcctgtcggcgctgcgtctgctggaagaagaggccgcgcgcggccatggc
agcctgatcacgctgcgcaccagccaggaagcatcgatctacgtgctcaacaacaagcgc
cgcgatctcgccgagatcgaggaacgcttcggcgtgcgcatcgaaattctgcccaatggg
gagaatgaaggcgcgaagatggaagtgaccgccagcggcccgcgtccggaaaagaccgtg
accttccagccgatcatcgacgacgatgacgacgaggaaatcgaagacgatatcgacgag
atcgaagaagaggaagaagcagcgccgcggcgcggccggggtgatcgcggaaatcgcggc
aaccgtggtgatcgcggtgatcgctccgagcgtggcgagcgggcagaccgtcccgaacgt
gctgaccgccccgaacgcgcagatggcgaagagcggaccgaacgcgcgccttcgcagcgc
acggccgaggaaggcgaaggcggtcgctccaagcggcgccgccgccgtcgcggcaagcgc
ggcaagcgcgatggcgacaccgctctcgacgaaaacggccagccggttcagaccgaagcc
tcatacgacaatggcaacgaggcggatttcgccagcgaagccggcgccgaggcaacgggt
gaaaccgacgaccagcgcgaagacaccggcacagacgaggcgaccactgccacggacgat
ggcggcgaagccaagccccgccgtgcgcggcgcggtcgtcgcggtggtcgtgcccgcaag
ggcggcgaaggtgatacgggcggcgatgcatcggacgaggcatcgagcgatgccgaagcc
ggcggtgcatcggccgacgaggctgcacccatgatcgaagcgtcaccggccaatgccgat
gtcgcgatcgcggatgctgcacccgagaccgaagacgccgctgaagcgcctgccgagaag
cccaagcccaagcgaaagtctcgcgccaagaagccggcagccgaagcagaagctgcgacc
gaggttgccgcagagcccgaagctgctgcagcatccgagaccgacgcggaagccgcaccg
gaagcggaagccaagcccaagcccaagcgcgcaccccgcaaaaaggctgcgcccaaggcc
gaagcgccgtccgaagcggtgacagacaccgcgcctgcggccaaggctgcggatgatgcg
gacgcacagccggtagctcaggcggctcctgcggctggccagcccgccgcagacagcaac
gagccgacgcgtcgcggctggtggcagcgcaccttcggcaactga
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