Blastomonas sp. RAC04: BSY18_2964
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Entry
BSY18_2964 CDS
T04450
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
blas
Blastomonas sp. RAC04
Brite
KEGG Orthology (KO) [BR:
blas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blas03032
]
BSY18_2964
03400 DNA repair and recombination proteins [BR:
blas03400
]
BSY18_2964
Enzymes [BR:
blas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSY18_2964
DNA replication proteins [BR:
blas03032
]
Prokaryotic type
DNA Topoisomerases
BSY18_2964
DNA repair and recombination proteins [BR:
blas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSY18_2964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
AOG00712
UniProt:
A0A1B3N5S7
LinkDB
All DBs
Position
complement(3155042..3156106)
Genome browser
AA seq
354 aa
AA seq
DB search
MDRVDKAARGDAAAVLDGGLIYTQDDAPGITRVRRGRGFSYHAPDGRLIRDAKTLTRIRM
LAIPPAYQQVWICPKPNGHIQATGRDDRGRKQYRYHAAFRASQDKAKFARLAKFGAALPE
MRERISADLRSRSTSRRCVIATIVHLLDCTAIRIGNAPYAQQNRSYGLTTLRQRHVTLES
STIRFRFAGKGGKKWDVSLRDRRVARVLRGLQELPGQQLFGYLDGDDVRAVTSDDINAYL
REIGGEDFSAKDFRTWCGTVTATAMLAELHQQEEPPAAAAAIKQAVLAASQALQNTPTIC
RKSYIHPAVLEAYDTDQARFAGMATDDAENEVLALLLEAENRGKRGTNRQSKRG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtggatcgagtggataaggccgcgcgcggagatgcggcggcggtgctggatggcggcctg
atctatacccaggacgacgcgccggggatcacccgggtgcggcgcgggcggggcttcagc
tatcacgcgccggacggccgcctgatccgggacgccaagacgctgacccgcatccggatg
ctggcgattccgcccgcttatcagcaggtgtggatatgcccgaagcccaacggccatatc
caggcgaccgggcgcgacgaccgcggccgcaagcaatatcgctatcatgccgcgtttcgg
gcgtcgcaggacaaggccaagttcgcgcgccttgccaagttcggcgcggcgctgcccgag
atgcgcgagcgcatcagcgccgatctgcgttcgcgcagcacctcgcggcgctgtgtcatc
gctaccatcgtgcatctgctcgattgcaccgcgatccgcatcggcaatgcaccctatgcg
cagcagaaccgctcttatgggctgaccacgctgcgccagcggcatgtgacgctcgaatcc
tcgaccatccgcttccggtttgccggcaagggcggcaagaaatgggatgtctcgctgcgc
gaccggcgggtggcgcgggtgctgcgcgggttgcaggagctgcccggccagcagctgttc
ggctatctcgatggcgacgatgtccgcgcggtgacatcggacgatatcaacgcgtatctg
cgcgagatcggcggcgaggatttctcggccaaggatttccgcacctggtgcggcaccgtg
accgccactgctatgctcgccgaactccaccagcaggaggagccgcctgcggccgccgcc
gcgatcaagcaggcggtgctcgcagcatcacaggcgctgcagaacacgcccaccatttgc
cgcaagtcctacatccatcctgccgtgctcgaggcgtacgataccgaccaggcgcgcttt
gccggcatggccacagacgatgccgaaaacgaggtgctggcgctgctgctggaggcagaa
aaccgcggaaaacgcggaaccaaccggcagtcgaagcgtggttag
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