Blastomonas sp. RAC04: BSY18_618
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Entry
BSY18_618 CDS
T04450
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blas
Blastomonas sp. RAC04
Pathway
blas03030
DNA replication
blas03430
Mismatch repair
blas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY18_618 (dnaE)
03430 Mismatch repair
BSY18_618 (dnaE)
03440 Homologous recombination
BSY18_618 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blas03032
]
BSY18_618 (dnaE)
03400 DNA repair and recombination proteins [BR:
blas03400
]
BSY18_618 (dnaE)
Enzymes [BR:
blas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY18_618 (dnaE)
DNA replication proteins [BR:
blas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSY18_618 (dnaE)
DNA repair and recombination proteins [BR:
blas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSY18_618 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
GT-D-like
Motif
Other DBs
NCBI-ProteinID:
AOG02111
LinkDB
All DBs
Position
603320..606805
Genome browser
AA seq
1161 aa
AA seq
DB search
MAYEPFVPLRVFSAYTMLEGAIEPKAIAKTAHARGFPAIALADRNGLYAGMPFADGCMES
GIQPIIGTLLCVARPDVAGSAPVLDWLALYAQNAAGYDNLCDLVSHAHLDRPLELPAHVP
FERLEGRTEGVIALTGAGEGALVRLLAAGQTDAAKAYCDRLQTLFGDRLYAELCRRGEEI
ETLAETALLDLAYARGLPLVATNPACYSDPGFHAAHDAMLCIARGEYVGAANRERSSPEA
WIKSAPMMRELFSDLPEALVNTLVVAQRCAFAPPKRKPILPSLAGDLEGEAAQLRADAFA
GLEMRLSTYTDQSEEERKAYFERLEFEVNVIVGMGFPGYFLIVADFIKWAKDHNIPVGPG
RGSGAGSVVAWALTITDLDPIRLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQAK
YGRDHVAQIITFGKLKARAVLRDTGRVLQMGYGRIDGLCKLVPNHPTDPWKLDRALAGVE
ELRHQYRDDAEVKRLFDLAMQLEGLPRHSSTHAAGVVIGDRPLAQLVPLYRDPRSDMPVT
QFDMKYVETAGLVKFDFLGLKTLSVLHKATEMLEKRGIKVDLSTLPWDDAGVYELLKRGD
TVGVFQLESEGMRRTLAQVKPTAFGDIIALVSLYRPGPMDNIPSFGARKNGRETITYPHP
LLEDILKETYGIIVYQEQVMQAAQVLAGYSLGDADLLRRAMGKKIKAEMDQQRGRFVEGA
GRNNIDTKKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPHEFFAASMCFDM
HQSEKLNIFVDDMRRMGVACLPPCINASEAEFSVEETPEGLAVRYALAGLKNVGEKAMEG
VVATRIASGPFASLGDFADRVDPGQLNKRQIESLAAAGAFDGFEIERASVHGGADMVLAV
AADAHRQRTSGQGGLFGDVQQPGQSLRLPASKPWAMGERMTAERDAFGFFFSAHPVTEFA
ATARSQGARPYQQVVETMDVRVGERKTAKVAALVEGCNRRQSKRGNAFVMVDLSDESGQF
SASSFDDDIVAAMPEWASQSACLLIELEFDRSSEDQAPRATIRRARPLDEIKVTFRHRAS
IDVLRPEALGQLSQLVGEPGGGQDELHARLIMGQGRVMPVKLGNRFRLDAETIEALRALD
GIAVRNVESFATQRPDLRLVS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgaacccttcgtcccgctgcgcgtcttctcggcatacacgatgcttgaaggc
gcgatcgagcccaaggcgattgccaagaccgcacacgcgcgcggctttcccgcgatcgct
ctggccgaccgcaacgggttgtatgcgggcatgccgtttgccgatggctgcatggaaagc
ggcatccagccgatcatcggaacgttgctgtgcgtggcgaggcccgatgttgcaggctct
gcgccggtgctcgactggctggcgctctatgcgcagaacgccgctggatacgacaatctg
tgcgatctggtgtcgcacgcgcatctcgaccgcccgctcgagcttcccgcgcacgttccg
ttcgaacggctcgaaggccgcaccgagggcgtgatcgcgctgaccggcgcgggcgagggc
gcgctggtgcggctgctcgccgctgggcagaccgatgccgccaaggcctattgcgaccgc
ttgcagacgctttttggcgaccggctgtatgccgaattgtgccgccgcggcgaggagatc
gagacgctggcagaaaccgcattgcttgaccttgcttacgcgcgcggcctgccgctcgtc
gccaccaaccccgcctgctattcggaccccggcttccacgccgcgcatgatgcgatgctg
tgcattgcgcgtggcgaatatgtcggcgcggccaaccgtgaacgcagctcgcccgaggcg
tggatcaagtccgcgccgatgatgcgcgagctgttcagcgatctgcccgaggctttggtc
aacactttggtcgtcgcgcagcgctgcgcctttgcgccgcccaagcgcaagccgatcctg
cccagccttgcaggtgatctcgagggcgaggcggcgcagctgcgagcggatgcgttcgcc
gggcttgagatgcggctgtcgacctataccgaccagagcgaggaagagcgcaaggcgtat
ttcgaacggctggagttcgaggtcaacgtcatcgtcggcatgggtttcccgggctacttc
ctgatcgttgccgacttcatcaaatgggccaaggatcacaacatcccggtgggtccggga
cgtggatcgggcgcgggctcggtcgtcgcctgggcgctgaccatcaccgatctcgacccg
atccggctggggctgctgttcgaacgttttctgaaccccgaacgcgtttccatgcccgac
ttcgatatcgacttttgcgaaacccggcgcggcgaggtgatccgctatgtccaggccaaa
tacggccgcgaccacgtggcgcagatcatcaccttcggaaaattgaaggcgcgcgcggtg
ctgcgcgacacggggcgtgtgctgcagatgggctatggccgcatcgacgggctgtgcaaa
ttggtacccaaccacccgaccgatccgtggaagctggatcgcgcgctggcaggcgtcgag
gagctgcgccatcagtatcgcgacgatgccgaggtcaaacggctgttcgaccttgcgatg
cagctcgagggcctgccacggcacagctctacccacgccgccggcgtcgtcatcggcgac
cgtccgctggcgcagttggtgccgctttatcgcgacccgcgatcggacatgccggtcacc
cagttcgacatgaagtatgtcgagaccgctggccttgtgaagttcgacttcctgggcctc
aagacgctgtcggtgctgcacaaggcgaccgagatgctggaaaaacgcggcatcaaggtc
gatctgagcacgctgccctgggacgatgcgggcgtgtacgaactgctcaagcgcggcgat
accgtcggcgtgttccagctggaatccgagggcatgcgccgcacgctggcgcaggtgaag
ccgaccgcgttcggtgacatcatcgcgctggtctcgctctatcgcccgggtccgatggac
aatatccccagcttcggtgcgcgcaagaacgggcgcgagacgatcacctatccgcacccc
ttgcttgaggacatcctcaaggaaacctacggcatcatcgtctatcaggaacaggtgatg
caggcagcccaggtgctggcgggctattcgctcggcgatgccgacctgttgcgccgcgcg
atgggcaagaagatcaaggcggagatggaccagcagcgcggccggtttgtcgagggcgca
ggccgcaacaatatcgacaccaagaaggccaacgagctgttcgacttgatcgacaagttc
gcaggctatggcttcaacaagagccatgcggcagcctatgcactgctcgcgtaccaaacc
gcgtggttgaaggcgcattacccgcacgagttcttcgcggcatcgatgtgtttcgacatg
caccagagcgaaaagctcaacatcttcgtcgatgacatgcggcggatgggcgttgcctgc
ctgccgccgtgcatcaacgccagcgaggccgagttctcggtcgaggaaacgcccgagggg
ctggcggtgcgctatgcgctcgcgggtctcaagaacgtcggcgaaaaggcgatggagggc
gtggtcgcgacgcgcatcgcgagcggtccgttcgcgtcgctgggcgactttgccgaccgg
gtcgatccgggccagctcaacaagcgccagatcgaaagcctggccgcagcaggcgccttt
gacggtttcgagatcgaacgcgcttcggtgcatggcggcgcagacatggtgctggcggtt
gcagcggacgcgcatcgccagcgcaccagcgggcagggcggtctgttcggcgatgtccag
cagccaggccagtcgctgcggttgcccgcatccaaaccttgggcgatgggcgagcggatg
accgcggagcgcgacgcgttcggcttcttcttctccgcgcacccggtgacagagtttgct
gcaaccgcgcgatcgcagggcgcacggccctatcagcaggtcgtcgagacgatggatgtc
cgcgtcggcgagcgcaagaccgccaaggtcgccgcgctggtggaaggctgcaaccggcgc
cagagcaagcgtggcaacgcctttgtcatggtcgacctgtcggatgaaagcgggcagttt
tcggcaagctctttcgatgacgacatcgtcgcagccatgcccgaatgggcgagccagtcc
gcctgtctgctgatcgagctcgagttcgaccggtcgagcgaggaccaggcgccgcgcgcc
accatccgccgcgcacgtccgctcgacgagatcaaggtgaccttccgccaccgcgcgagc
atcgacgtgctgcgacccgaggcgctggggcagctctcgcaactggtgggcgaacccggc
ggcggccaggacgaactccacgctcggctgatcatggggcaggggcgggtgatgccggtc
aagctcggcaatcgcttccggctggatgccgagacgatcgaggcgctgcgcgcgctcgat
gggattgcggtgcgcaatgtcgaatcctttgccacccagcgccccgacctgcgcctcgtg
agttga
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integrated database retrieval system
