Burkholderia latens: WK25_00990
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Entry
WK25_00990 CDS
T04819
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blat
Burkholderia latens
Pathway
blat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WK25_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blat03019
]
WK25_00990
03400 DNA repair and recombination proteins [BR:
blat03400
]
WK25_00990
Enzymes [BR:
blat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WK25_00990
Messenger RNA biogenesis [BR:
blat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WK25_00990
DNA repair and recombination proteins [BR:
blat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WK25_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOK03166
UniProt:
A0A1B4NN80
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All DBs
Position
1:complement(194527..196374)
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGH
GAGIVVSPLIALMQDQVAALSEVGVRAAFLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLELLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCLEPPDSWDATREAQMA
LSCVFRAQRASGFNFGASHLIEILRGNRTEKVLQRGHEQLSTFGIGASLSEPEWRAIFRQ
LVAYGYLAVDHGGFGALVLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGTRERARWDALRAWRAETAKSDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgccctcgaaatcctcgacgaagtctttggttattccgcatttcgcggccag
cagggcgagatcgtcgaacacgtcgccggcggcggcgattgcctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctatcagattccggcgctgctgcgccgcgaggccgggcac
ggcgcgggcattgtcgtgtcgccgctgatcgcgctgatgcaggatcaggtcgccgcgctc
agcgaggtcggcgtgcgcgcggccttcctgaactcgacgctgtccggcgccgaggccgcg
gccaccgagcgtgcgctgcgcgaaggcgagatcgacctgttgtacgtcgcgcctgagcgc
ctgatgaccgggcgttttctcgagctgctcgagcgcgcgaagatcggcctgtttgcgatc
gacgaggcgcactgcgtgtcgcagtggggtcatgacttccgccccgaatacatccagctg
tcggtgctgcacgagcgctttccgtcggtgccgcgcatcgcgctgacggccaccgccgac
gcaatcacccgcgacgagatcattcatcgcctcgcactcgacgatgcgcgcgtcttcgtg
tcgagcttcgatcgtccgaacatccgctatcggatcgtcgaaaaggacaacgctcgctcg
cagctgctcgacttcatccgcgccgagcatacgaatgcggacggcacgaccgacgcgggc
gtcgtctactgtctgtcgcgccgcaaggtcgaggaaaccgccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgccgggatggaattcgaggtgcgtcagaagcaccag
gaaatgttccagcgcgaggaaggcatcgtcatgtgcgcgacgatcgcattcggcatgggc
atcgacaagccggacgtgcgcttcgtcgcccacctcgatttgccgaagagcgtcgaaggc
tattaccaggaaaccggtcgcgcgggccgcgacggattgcctgcgaatgcgtggatggcg
tacggcctcggcgacgtcgtgcagcagcgcaagatgatcgacgaatcggatgcggacgac
gcgcacaagcgcgtgcagacgtcgaagctcgacgcgctgctcgggctgtgcgagacgatc
tcgtgccgccgcgtgcggctgctgaattacttcggcgaagcgagccagccgtgcggcaac
tgcgacacatgccttgagccgccagattcctgggatgcgacgcgcgaggcgcagatggcg
ttgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggcgcgagccatctt
atcgagatcctgcgcggcaaccgcaccgagaaggtgctgcagcgcggacacgaacaactg
agcacgttcgggatcggcgcgtcgctgtccgagccggagtggcgcgcgattttccggcaa
ctcgtcgcgtacggctatcttgccgtcgatcatggcggtttcggtgcgctggtgctcacc
gaggccgcgaagcccgtgctgaagaacgaggagaaggtcacgctgcgccgctatgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcagcggcacgcgcgtcgatccgacggccggc
atgggcacgcgcgagcgcgcgcgctgggacgcgctgcgcgcgtggcgtgcggaaaccgcg
aagtccgacggcgtgcccgcctacgtgatcttccacgacgcgacgctcgccgaaatcgcg
cgcaacgcgccggagacgatcgacgaccttcgccacatccccggcatgggcgtacgcaag
ctcgaacgctttggcgacgagatcatcgacgtcgtcgaatcggcgtga
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