Burkholderia latens: WK25_02950
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Entry
WK25_02950 CDS
T04819
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
blat
Burkholderia latens
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blat03016
]
WK25_02950
Enzymes [BR:
blat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WK25_02950
Transfer RNA biogenesis [BR:
blat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WK25_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOK03505
LinkDB
All DBs
Position
1:627399..629498
Genome browser
AA seq
699 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAASELMQEADSA
AQQIDLDFLWECAPAEEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPDAFAGKVLGLLTRPDKNSIEYKA
LEAAAGARGVSPARLMLDCGGIESARALHEARFLAEFFPHGTGFPPVTVGPLPDDLPRAD
VAAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIVRGDPVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQDIVANETRAELVFVKSNLRHNT
LDELVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAADDEDDNEGGDDTLVDAQDE
SAESEAVALAESGDAASEGGDAASGGGEERAASDEGRAS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgggccaaggtgcgtgcaaaggac
gtgctgatcgaattcgacaagccggccgcgagcgaattgatgcaggaagccgattcggcc
gcgcagcagatcgacctcgatttcctgtgggaatgcgccccggccgaggaattcgcatat
acagcgctcgccgccgagtacttcggcgcgacctatggcccggtcgagcgcgcggcgctg
gtgctgaggctgcacggctcgcccgtctacttccgccgcaaggggcgcggacagtatcag
cgcgcgccggaggagcagctcaaaatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtgcaggcgcagtacgaagaggaactgaaggccggcaagctgccggacgcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaactcgatcgaatacaaggcg
ctcgaggcggcggccggcgcgcgcggcgtatcgccggcgcgactgatgctcgactgcggc
ggcatcgagtcggcgcgcgcgctgcacgaggcgcgtttcctcgccgaattctttccgcac
ggcaccggctttccccccgtcacggtcggtccgctgccggacgacctgccgcgcgcggac
gtcgcggcgttctcgatcgacgacatcacgacgaccgaaatcgacgatgcgttctcggtc
gagcacctggccgacggccgcgtgcggatcggcgtgcacatcgcggcgccggcactcggc
atcgtgcgcggcgatccggtcgacgcgatcgcgcgcgcccggctgtcgaccgtctatatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtattcacgctgaaagaa
ggcgactatcgtcccgcgctgtcgctgtacatcatcgtcaaccgcgagacgcaggacatc
gtcgcgaacgagacgcgcgcggaactcgtgttcgtgaagagcaacctgcgccacaacacg
ctcgacgagctcgttaccgaagagacgctcgcggccggcaccggcgattatccgcacaag
gacgacatcgcggtgctgtggccgctcgcgcaggcgttgttcgagaagcgtcaggtcgcg
cgcgcgggctatggcctcaagcgcgaggtgcagcgcaacaccgattacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgtcgcggctcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacgtggggcgcattcctgcacgaccacacggtg
cccggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagaccacggccgcgccgcacgaaggcctgggcgtcgcgcagtacgcgtggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagttgctggcgtgcgtgcagcac
ggcgtgaccgcgaagctcgccgcgccgttcaagccgaaggacgccgatctgtacgcggtg
gttcagggcttcgacgatacctacaccgcatacgccgattaccagcgccggatggagtac
ttctggtgcctgcgctggctcgcgcaggaacagaagaagcaggtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctggacgagctgacgatc
gaggcgtcggtgcgactgctgaacgtgctcgacgcgccgaccgtcacgagcggcgacgcg
gccgacgatgaagacgacaacgaaggcggcgacgacacgctggtcgatgcgcaggacgaa
tcggcggaaagcgaggccgtagcgctggccgaatcgggcgacgcggcgtccgaaggcggc
gatgccgcaagcggtggcggcgaggaacgcgcggcaagcgacgaagggcgcgcatcatga
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