Burkholderia latens: WK25_08630
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Entry
WK25_08630 CDS
T04819
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
blat
Burkholderia latens
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blat03009
]
WK25_08630 (rimO)
Enzymes [BR:
blat01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WK25_08630 (rimO)
Ribosome biogenesis [BR:
blat03009
]
Prokaryotic type
ribosomal protein modification factors
WK25_08630 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOK04518
LinkDB
All DBs
Position
1:complement(1853383..1854744)
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AA seq
453 aa
AA seq
DB search
MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDASAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
RDICPDLTIRSTFIAGFPGETEEQFDTLLDFIREAELDRVGCFAYSPVEGASANELDGAL
PDEVREARRARFMEVAEEVSARRMQRKVGKTVKVLIDEVNAEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcccccaaagtaggcttcgtatccctcggctgcccgaaggccctcgtcgac
tccgagcaaatcatcacgcagctgcgcgccgaaggttatgaaatctccggcacgtatgac
ggcgcggatctcgtcgtcgtcaacacctgcggcttcatcgacgaagccgtgcaggaaagc
ctcgacgcgatcggcgaggcgctgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggcgcgaagtcgagcgccagcggctcgaacctcatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgccgtgggtgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgatccgttcgtcgacctcgtgccggccgccggcatcaagctcacgccgcgt
cactacgcatacctgaagatctccgaaggttgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgatctggtgtcgcgtccggtcgccgaagtgatgctcgaggccgag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggatgcgagcgcgtac
ggcgttgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
acggacctcgtcgccgcgctcggcgaactcgccgcgcagtacggcgcgtgggtgcgcctg
cactatgtgtatccctatccgagcgtcgacgaagtcattccgctgatggccgaaggcccg
ttcaagggccacgtgcttccgtatctcgacgtgccgttccagcacgcgcatccggaagtg
ctcaagcgcatgaagcgtccggcgaacgcggagaaggtgctcgagcgcgtgcaaaagtgg
cgcgacatctgcccggatctgacgatccgcagcacgttcatcgccggcttcccgggcgag
acggaagagcagttcgacacgctgctcgatttcattcgcgaagcggaactcgatcgggtc
ggctgtttcgcgtattcgccggtcgaaggggcgagcgcgaacgaactcgacggcgcactg
ccggacgaggttcgcgaagcgcgtcgcgcgcgtttcatggaggtcgccgaggaagtgtcg
gcacggcgcatgcaacgcaaggtcggcaagaccgtgaaggtgctgatcgacgaagtcaac
gcggaaggcggcatcggccgcacggcggcggatgcgcccgagatcgacggcgtcgtttat
gtcgagccggcggcgaaggcttcgaagcgctacaaggtcggcgatttcgtgtccgtgaag
atcaccggcgcggacggtcacgacctgtggggcgaggtctga
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